Halorubrum sp. 2020YC2: KI388_14135
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Entry
KI388_14135 CDS
T08040
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03030
DNA replication
hazz03420
Nucleotide excision repair
hazz03430
Mismatch repair
hazz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI388_14135
03420 Nucleotide excision repair
KI388_14135
03430 Mismatch repair
KI388_14135
03440 Homologous recombination
KI388_14135
03460 Fanconi anemia pathway
KI388_14135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hazz03000
]
KI388_14135
03032 DNA replication proteins [BR:
hazz03032
]
KI388_14135
03400 DNA repair and recombination proteins [BR:
hazz03400
]
KI388_14135
Transcription factors [BR:
hazz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
KI388_14135
DNA replication proteins [BR:
hazz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
KI388_14135
DNA repair and recombination proteins [BR:
hazz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
KI388_14135
MMR (mismatch excision repair)
KI388_14135
DSBR (double strand breaks repair)
HR (homologous recombination)
KI388_14135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_MEIOB_N
Ssb-like_OB
RADX
Imm31
Motif
Other DBs
NCBI-ProteinID:
QWC19221
UniProt:
A0A8E8EWJ7
LinkDB
All DBs
Position
2838185..2839681
Genome browser
AA seq
498 aa
AA seq
DB search
MGAIEEVYEDLDTDVEFEEFEAAVEDKVEQMGGLADEETAAMLIAHELRDEEADTIADIE
PGMNEVKFLGKVTAIGEVRTFERDDDEAEEGRVCNVDVADASGSVRVALWDDMAAAAEEE
LEVGQVLRVMGRPKEGYSGLEVSADKVEPDEDAEVDVQVLDTYRVEDLTLGASDVDLVGQ
VLDTDSIRTFDRDDGSEGRVANLTVGDETGRVRVTLWDGKADLAGEFEAGEVVEVGDGYV
RERDGDLELHVGDRGTVERVDEDVEYVPETTDVDDLEIGQTVDIAGGVIETDPKRTFDRD
DGSEGQVRNVRIRDETGEIRVALWGDKADREIELADRVVFTDVEIQDGWQDDLEASANWR
STVSVLDGGSDAAAGAASGASGSAAGRDGSDGGDRGADETGLGAFAEDGQKAAAEAVAGE
SGGDDESGASGGAAAATTERSAEDVEFTGTVVQTGDPVVLDDGQQTKSVDTDASLRLGEE
ITVRGPERDGTIDADDVF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgggagccatagaggaggtgtacgaggacctcgacacggacgtcgagttcgaggagttc
gaggccgccgttgaggacaaagtcgagcagatgggcggactggcggacgaggagaccgcc
gcgatgctcatcgcgcacgagctacgcgacgaggaggccgacaccatcgcggacatcgag
ccggggatgaacgaggtgaagttcctggggaaggtgaccgccatcggcgaggttcggacc
ttcgagcgcgacgacgacgaggccgaggagggccgggtgtgtaacgtcgatgtcgcggac
gcctccggctccgtccgggtcgcgctgtgggacgacatggccgcggcggccgaggaggag
ctcgaagtcgggcaggtcctccgcgtcatgggccgccccaaggaggggtacagcggcctc
gaagtgagcgccgataaggtcgaacccgacgaggacgccgaggtcgacgtccaggtgctc
gacacctaccgggtcgaggatctcacgctcggcgcgtccgacgtggacctcgtcggacag
gtgctcgacacggactcgatccggacgttcgaccgcgacgacggcagcgagggccgcgtg
gccaatctcaccgtgggcgacgagaccggccgcgtgcgcgtcacgctgtgggacggcaag
gccgacctcgccggggagttcgaggccggcgaggtcgtcgaggtcggggacggctacgtc
cgcgagcgcgacggcgacctggagctgcacgtcggcgaccgcggcaccgtcgagcgcgtc
gacgaggacgtggagtacgtcccggagacgaccgatgtcgacgacctcgagatcgggcag
acggtcgatatcgccggcggcgtcatcgagaccgacccgaagcggacgttcgaccgcgac
gacggcagcgaggggcaggtgcgcaacgttcggatcagagacgagacgggcgagatccgc
gtcgcgctgtggggcgacaaggccgaccgcgagatagagctggccgaccgcgtcgtcttc
accgacgtcgagattcaggacggctggcaggacgacctggaggcgtccgcgaactggcgc
tcgaccgtttccgtcctcgacgggggaagcgacgcggcggccggggccgcgagcggagcg
tcgggatccgccgccgggagagacggtagcgacgggggcgaccgcggcgcggacgagacc
gggctcggcgccttcgccgaggacggacagaaggcggccgccgaggcggtcgcgggcgag
tccggcggggacgacgagagcggcgcgagcggcggcgccgccgccgcgacgacggaacgg
tcggccgaggacgtcgagttcaccgggacggtggtccagacgggcgacccggtcgtgctc
gacgacggccagcagacgaagtccgtcgacaccgacgcgagcctccggctcggggaggag
atcacggtccgagggccggagcgcgacggcaccatcgacgcggacgacgtcttctga
DBGET
integrated database retrieval system
