Halorubrum sp. 2020YC2: KI388_14560
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Entry
KI388_14560 CDS
T08040
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
hazz
Halorubrum sp. 2020YC2
Pathway
hazz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KI388_14560 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hazz03019
]
KI388_14560 (prf1)
03012 Translation factors [BR:
hazz03012
]
KI388_14560 (prf1)
Messenger RNA biogenesis [BR:
hazz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
KI388_14560 (prf1)
Translation factors [BR:
hazz03012
]
Eukaryotic type
Release factors
KI388_14560 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Zn_ribbon_8
ZnF_RZ-type
Motif
Other DBs
NCBI-ProteinID:
QWC19302
UniProt:
A0A8E8KA17
LinkDB
All DBs
Position
2930703..2931953
Genome browser
AA seq
416 aa
AA seq
DB search
MSSDAQEANEDRRKYEFRKVIEELKDFEGSGTQLVTIYIPEDRQISDVVAHVTQEHSEAS
NIKSKQTRTAVQDALTSIKDRLRYYDTFPPENGIVLFSGAIDAGGGQTDMVTRTLESPPQ
PVESFRYHCDSEFLTEPLEHMLEDSGLFGLIVLDRREANVGWLKGKRVEAVKSASSLVPG
KQRKGGQSAQRFARLRLEAIDNFYQEVAGMANDLFVDKRHELDGILVGGPSPTKDEFLDG
DYLHHELQDKVLGKFDVAYTDESGLKDLVDNASEALADQEIVEDKRNMEEFFEKLNTGQE
ATYGFEQTRRNLIMGSVDRLLISEDLRSDVVVYECPNDHEEYEVIDSRHSTPDHECSECG
EAAAVDEREDVIEHLMAIAEQRGTDTKFISTDFEKGEQLLDAFGGIAGILRYSTGV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgacgcacaggaggcgaacgaggaccgccggaagtacgagttccgcaaggtc
atcgaggagctcaaagacttcgagggctccggcacccaactcgtcaccatctacatcccc
gaagacaggcagatctccgacgtggtggcccacgtcacccaggaacacagcgaggcgtcg
aacatcaaatccaagcagacccggaccgccgtccaagacgcgctgacgtcgatcaaggac
cgactccgctactacgacaccttcccgcccgagaacggcatcgtgctcttctcgggcgcc
atcgacgcgggcggcggccagaccgacatggtcactcggacgctggagtcgccgccacag
cccgtcgagtcgttccggtaccactgcgactcggagttcctcaccgagccgctcgaacac
atgctcgaagactccgggctgttcgggctcatcgtcttggaccgccgcgaggcgaacgtc
ggctggctgaaggggaaacgcgtcgaggccgtcaagtcagcctcctcgctcgtccccggc
aaacagcggaaagggggtcagtccgcacagcggttcgcccgcctgcgcttagaggccatc
gacaacttctatcaggaggtcgcggggatggccaacgacctgttcgtcgacaagcgccac
gaactggacggtatcttggtcggcggtccctccccgacgaaagacgagttcctcgacggc
gactacctccaccacgagctacaggacaaggtgctggggaagttcgacgtggcctacacc
gacgagtccgggctgaaggacctcgtcgacaacgcgagcgaggcgctcgcggaccaagag
atcgtcgaggacaaacgcaacatggaggagttcttcgagaagctcaacaccggccaggag
gcgacctacgggttcgagcagacccgccggaacctcatcatggggtcggtggaccgcctg
ctcatctccgaggacctccgctccgacgtcgtcgtctacgagtgcccgaacgaccacgag
gagtacgaggtgatcgactcgcgacactcgacgcccgaccacgagtgtagcgagtgcggc
gaggccgccgcggtcgacgagcgcgaggacgtcatcgagcacctgatggccatcgcggaa
cagcgcggcacggacacgaagttcatctcgacggacttcgagaagggcgaacagctgctc
gacgcgttcggcggcatcgcgggtatcctgcgctactcgacgggcgtctaa
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