Halorubrum sp. 2020YC2: KI388_14625
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Entry
KI388_14625 CDS
T08040
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hazz
Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:
hazz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hazz03400
]
KI388_14625
DNA repair and recombination proteins [BR:
hazz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI388_14625
Archaeal homologous recombinant proteins
KI388_14625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
SMC_N
AAA_15
AAA_29
AAA_27
Fib_alpha
AAA_13
GAS
TPR_MLP1_2
zf-C4H2
ZnF_RZ-type
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QWC19312
UniProt:
A0A8E8EWR7
LinkDB
All DBs
Position
complement(2942639..2945332)
Genome browser
AA seq
897 aa
AA seq
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MKFDRVRLANFKPYGDADLRLTEGVTVIHGLNGSGKSSLLEACFFALYGSKALDGTLEDV
ITNGEEETEVELWFTHDGVSYRVERRLKSYDGRIDHQCELESTDGSDVSRDGARAVREFV
TELLRMDAEAFVNCAYVRQGEVNKLINATPRERQDTIDDLLQLGKLEEYRERAGDARLGV
EDVMENRRGRLDQLDEQIAAKEDRDLHARLNELEGELGEVADEIDRYESQRERARETREA
AAETLETHAEKREKLEAVETEIDEIEESIREAERERDDLRDAVREARERIDEIEAEIDDR
LDDAGLDAASEAAIAERRGALDDREAEVREALDDERVSAEAFRNQATNLAGKADDRVERA
EAVESEAGDLAAEAEAAADDADERESSVAELREEAETLRERFAAADADVDRDGVVDERDR
LREGRGEVRERIAELSADLKNARERVAEAEELLAAGKCPECGQPVGDSPHASGIEEDRER
VAELEGELEDAREREGDLDERIAELDELASAADRLDGIDERVDALEERVEEKRSEAERKR
EAAEAKRERAAELREEAEETREVAAEKREQAEEAAARVEELEASLSEVDDAREAVTAVEE
RLSAVAEAETENERRRERRENLTEVNDERRDRLADKRERRDELADAVDEAAVEKAEGRKE
DAEQYLEKVAGELDRLGERREELQNAIGGVKGELRELEELREEREALGERVEALEGLHEE
TSELESMYGDLRAELRQRNVTELERTLNETFELVYGNDAYSHIELDGEYVLTVYQKDGEP
LDPEQLSGGERALFNLSLRCAIYRLLSEGIEGAAPTPPLILDEPTVFLDSGHVSRLVRLV
EEMRGFGVRQIVIVSHDDELVGAADELVTVEKDPRSNRSTVRREDAADLDVAELAGD
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgaagttcgaccgcgtccgcctcgcgaacttcaagccgtacggcgacgccgacctgcgg
ctgacggagggggtcacggtgatccacgggctgaacggcagcgggaagtcgtcgctgttg
gaggcctgcttcttcgcgctgtacgggtcgaaggcgctcgacggcaccctcgaagacgtc
atcacgaacggcgaagaggagacggaggtcgaactgtggttcacccacgacggcgtctcc
taccgcgtcgagcgccgcctcaagtcctacgacggccggatcgaccaccagtgtgagctc
gaatcgaccgacgggagcgacgtgagccgcgacggcgcgcgggcggtccgcgagttcgtc
acggagctactgcggatggacgccgaggcgttcgtcaactgcgcgtacgtccgacagggc
gaggtgaacaagctgataaacgccacgccccgcgagcggcaggacacgatagacgacctg
ctccagctggggaaactggaggagtaccgcgagcgcgccggcgacgcccggctcggcgtc
gaggacgtgatggagaatcgccgcgggcggctcgaccagctcgacgagcagatcgccgcg
aaggaggaccgcgacctccacgcgcggctcaacgagctggagggcgagctcggggaggtc
gcggacgagatcgaccggtacgagagccagcgggaacgggcgagggagacgcgcgaggcg
gccgcggagacgctcgagacccacgcggagaagcgggagaagctggaggcggtcgagacc
gaaatcgacgagatcgaggagtcgatccgagaggccgaacgcgagcgcgacgacctccgc
gacgccgtccgcgaggcccgcgagcggatcgacgagatcgaggccgagatcgacgaccgg
ctcgacgacgccgggctcgacgcggcgagcgaggctgcgatagccgagcgacgcggagcg
ctcgacgaccgggaggccgaggtccgcgaggcgctcgacgacgagcgggtgagcgccgag
gcgttccgaaaccaggcgacgaacctcgccggaaaggcggacgaccgcgtcgagcgcgcc
gaggcggtcgagtcggaggccggcgatctggcggcggaggccgaggcggcggcggacgac
gccgacgagcgcgagtcctcggtcgcggagctccgtgaggaggcggagacgctccgcgag
cggttcgcggccgccgacgccgacgtcgaccgcgacggcgtcgtcgacgagcgcgaccgc
ctccgggagggacgcggcgaggtccgcgagcggatcgcggagctgtcggcggatctgaag
aacgcccgggagcgcgtcgcggaggccgaggagctgctcgcggccggaaagtgtcccgag
tgcggccagccggtcggggactcgccgcacgccagcgggatcgaggaggaccgcgagcgg
gttgcggagctcgaaggcgaacttgaggacgcccgcgagcgcgagggcgacctcgacgag
cggatcgcggagctggacgagctcgcaagcgcggcggaccggctcgacgggatcgacgag
cgggtcgacgccctcgaagagcgggtcgaggagaagcgatcggaggcggaacggaagcga
gaggccgccgaagcgaagcgcgagcgcgccgccgaactccgcgaggaggccgaggagacc
cgggaggtcgccgcggagaagcgcgagcaggccgaggaagccgcggcgcgcgtcgaggag
ctggaggcgtcgctgtccgaggtcgacgacgcccgcgaggcggtgaccgcggtcgaggag
cgcctgtccgcggtcgcggaggcggagaccgaaaacgagcgtcgccgcgagcggcgcgag
aacctgacggaggtgaacgacgagcggcgcgaccggctcgcggacaagcgggagcgccgc
gacgagctggcggacgccgtcgacgaggccgcggtcgagaaggcggaagggcggaaggag
gacgcagagcagtacctcgagaaggtcgccggcgagctcgaccgcctcggcgagcggcgg
gaggagctccagaacgcgatcggcggggtgaaaggcgaactgcgggagctagaggagctc
cgcgaggagcgcgaggcgctcggggaacgggtcgaggcgctcgaaggcctccacgaggag
acgagcgagctggagtcgatgtacggcgacttacgcgcggagctccgccagcgcaacgtc
accgaactggagcgcacactcaacgagacgttcgagctggtctacggcaacgacgcctac
tcgcacatcgagctcgacggcgagtacgtcctcaccgtctaccagaaggacggcgagccg
ctcgaccccgagcagctctccggcggcgagcgcgccctgttcaacctctcgctgcgctgt
gcgatctaccggctgctctccgaggggatcgagggggcggcgccgaccccgccgctcatc
ctcgacgagccgacggtgttcctcgactccggccacgtctcgcggctcgtccgactcgtc
gaggagatgcgcggcttcggcgtgcgccagatcgtcatcgtgagccacgacgacgagctg
gtcggcgcggccgacgagctggtcaccgtcgagaaggacccgcgctcgaaccgctcgacc
gttcgccgagaggacgcggcggacctcgacgtcgccgaactcgcgggcgactga
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