KEGG   Halorubrum sp. 2020YC2: KI388_14930
Entry
KI388_14930       CDS       T08040                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hazz  Halorubrum sp. 2020YC2
Brite
KEGG Orthology (KO) [BR:hazz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hazz03400]
    KI388_14930
Enzymes [BR:hazz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KI388_14930
    5.6.2.6  RNA 3'-5' helicase
     KI388_14930
DNA repair and recombination proteins [BR:hazz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KI388_14930
SSDB
Motif
Pfam: DEAD DEAD_assoc Helicase_C WH_Lhr ResIII AAA_25 PqqD HypA DEXQc_Suv3 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: QWC19369
UniProt: A0A8E8EWV2
LinkDB
Position
complement(3006306..3009221)
AA seq 971 aa
MAEQSGMGAFAHLGSEVREALSDRGFATPTEPQREAIPPLAAGRNALVLAPTGTGKTETA
MLPVFDAIVEARDSPGDQPRDGISALYITPLRALNRDMMDRLEWWGDRLDVEVAVRHGDT
TQYERSKQADDPPDVLITTPESLQAVLTGSKMRVALEDVAHVVIDEVHELASAKRGAQLT
VGMERLRRVAGPFQRVGLSATVGDPEEVGRFLVGTGKRDPDRPGDRGFETVEVAAGTRTD
VRVLDPEITDRDATLAGELAVDETTASHVRTIRGIVADHESTLIFVNTRQTAEALGSRFK
TLAEKEREGGTDDPTEIELHHGSLSKEVRVDVEDRFKSGDLDGLVCTSSMELGIDVGRVD
HVVQYGSPREVARLLQRVGRAGHRRDLVSEGTVVTQGGDDTLEAMAIARRAGEELVEPAN
IHHGSLDTVANQIVGLVMDEGGVHAREAYETVTNAYPFRDLSEPRFQEVVRELDGNRLLW
LDEETDTVEKSGGTWQYFYANLSMIPDESTYEVYDMSSRRGIGTLDEQFVVNFAGPGETF
VQRGEMWRITEVDEEEERVNVTPIPDPTGEVPSWVGQEIPVPKPVAEEVGRIRGEAAAAL
EAGSTPEAVAADLADRYPTDEETVAAALKSVVDHVEAGHPVPTDERIAIEGSARTVAVNA
AFGHEVNETLARLLAALVGQRAGSSVGMDVDPYRIEFEVPHDVDPGTFREVLETTDPDRL
EAYLELAVKKSDALKFTLAQVAAKFGAVKRYKEGRGRFGGDRLLAALEDTPVYDEALREV
FHADLAVRETADLLAGIQDGSLGLAIARERTPLGTAGRSAGTEFLVPDNADADVIETVRE
RIQDDRVILFCLHCADWRHTTKVRRVRDQPECPECGSTRVAALNPWDDETVAAVRASEKD
DEQERRTERAHRAASLVQTHGKRAVIALAARGVGPHNAARIINKLREDEDEFYRDVLRQE
REYARTQSFWD
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggcggaacagtcggggatgggcgcgttcgcgcacctcgggagcgaggtccgcgaggcg
ctctcggaccggggctttgccacgccgacggagccccaacgcgaggcgatcccgccgctc
gcggccgggcggaacgccctcgtcttggccccgacgggcaccgggaagacggagaccgcg
atgctccccgtcttcgacgcgatcgtcgaggcccgggattcgcccggcgaccagccccgc
gacggtatctccgccctctacatcactccgctgcgcgcgctcaaccgcgacatgatggac
cggctggagtggtggggcgaccgcctcgacgtcgaggtcgcggtgcgccacggcgacacc
acccagtacgagcggtcgaagcaggccgacgaccccccggacgtgctgatcacgacgccg
gagagcctccaagcagtcttgaccggctcgaagatgcgggtcgccctggaggacgtcgcg
cacgtcgtgatcgacgaggtccacgaactcgcctcggccaagcggggcgcccagctcacg
gtcggcatggagcggctccgccgcgtcgccggcccgttccagcgcgtcgggctctccgcg
acggtcggcgacccggaggaggtcgggcgcttcctcgtcgggaccgggaaacgcgacccg
gaccgccccggcgaccgcggcttcgagacagtggaggtcgccgccgggacgcggaccgac
gtgcgcgtcctcgaccccgagataaccgaccgcgacgcgacgctcgcgggcgagctcgcg
gtagacgagacgaccgcgagccacgtccggacgatccgcggaatcgtcgcggaccacgag
tcgacgctgatcttcgtcaacacgcgccagaccgcggaggcgctcgggtcgcggttcaag
acgctcgctgagaaagagcgtgaggggggaaccgacgaccccaccgagatagagctccac
cacggctcgctctcgaaggaggtccgggtcgacgtggaagaccggttcaagtcgggcgat
ctggacggcctcgtctgtacctcctcgatggagctggggatcgacgtgggccgcgtcgac
cacgtcgtccagtacggcagcccccgcgaggtcgcccgcctgctgcagcgcgtcgggcgc
gcgggccaccgccgcgacctcgtctccgaggggaccgtcgtgacgcagggcggcgacgac
acgctcgaagcgatggccatcgcgcgccgcgcgggcgaggagctcgtcgagccggcgaac
atccaccacgggagcctcgacacggtcgcgaaccagatcgtcggcctcgtgatggacgag
gggggggtccacgcccgcgaggcgtacgagaccgtcacgaacgcctacccgttcagggac
ctctcggagccgcggttccaggaggtcgtccgcgagctggacggcaaccgcctgctgtgg
ctcgacgaggagacggacaccgtagagaaatcgggggggacgtggcagtacttctacgcg
aacctctcgatgatccccgacgagtccacctacgaggtgtacgacatgtcctcgcggcgg
ggtatcgggaccttagacgagcagttcgtcgtcaacttcgccgggccgggcgagacgttc
gtccagcgcggcgagatgtggcggatcaccgaggtcgacgaggaggaggagcgggtgaac
gtgacgccgatccccgacccgaccggcgaggtaccgtcgtgggtcggtcaggagatcccc
gtcccgaagcccgtcgcggaggaggtcggccgaatacgcggcgaggccgcggccgccttg
gaggccggctccacccccgaggcggtcgccgccgacctcgcggatcggtacccgaccgac
gaggagacggtcgccgccgcgctgaagtcggtcgtcgaccacgtcgaggccggccacccc
gttcccacggacgagcggatcgcgatcgaggggagcgcgcggaccgtcgcggtcaacgcc
gccttcggccacgaggtcaacgagacgctcgcgcgcctgctcgcggcgctcgtcggccag
cgcgccggctcgtcggtcgggatggacgtcgacccgtaccggatcgagttcgaggtgccc
cacgatgtcgacccggggaccttccgcgaggtactggagacgaccgaccccgaccgcctt
gaggcgtacctcgaactcgccgtcaagaagtcggacgcgctgaagttcacgctcgcgcag
gtcgccgcgaagttcggcgccgtcaagcggtacaaagagggtcgcgggcggttcggcggc
gaccgcctgctcgccgccctcgaagacacgcccgtctacgacgaggcgctccgcgaggtg
ttccacgccgacctcgcggtccgggagacggccgacctgctcgctgggatccaagacggc
tccctcggcctcgcgatcgcccgggagcgcaccccgctcggcaccgccgggcgctccgcc
ggcacggagttcctcgtgcccgacaacgccgacgccgacgtgatcgagacggtcagagag
cggattcaggacgaccgggtgatcctcttttgtctccactgcgcggactggagacacacg
acgaaggtccgtcgcgtccgcgaccagcccgagtgtcccgagtgcgggtccacccgggtc
gcggcgctcaacccgtgggacgacgagacggtcgcggcggtgcgcgcgagcgagaaggac
gacgagcaggagcgccgcaccgagcgcgcccaccgcgccgcgagcctcgtccagacgcac
ggcaagcgggcggtgatcgccctggccgcccgcggcgtcgggccgcacaacgccgcgcgg
atcatcaacaagctccgcgaggacgaagacgagttctaccgggacgtgctccgacaggag
cgcgagtacgcgcgcacgcagtcgttctgggattag

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