Hirschia baltica: Hbal_0027
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Entry
Hbal_0027 CDS
T00945
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hba
Hirschia baltica
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_0027
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Hbal_0027
Archaeal homologous recombinant proteins
Hbal_0027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ACT57729
UniProt:
C6XKD1
LinkDB
All DBs
Position
complement(26180..29248)
Genome browser
AA seq
1022 aa
AA seq
DB search
MRPIRLTLQAFGPFAGKEVINFEQTFDVGLFGIYGPTGAGKTSIFDGLCFALFGQSSGAQ
RDGKDFRSDHAPLDMLTEVELVFDLGDKRYVVRRIPAQERLAKKGGKTTQQLHQAWLFDA
SGLNTQDITDANRGKAIAEKKTSVVEQTISELLGYSADQFRQIILLPQGQFRKVLDANTK
DRSQILRQLFDVSLYEKLQDKLKEEAKALHEKVNTARIRRDDRLMQSGHETFEALELAIK
EAHEQVKKSQAALDAAKKNHSTKRDTLEKAKSNDARFVELEKAKADLITLQANQSDIDAR
KADLEKVRRAESLLGLEAGLSRAKLDHKEASQRQIEAKVNLEKAEKANASAKVKLTDIQK
QTSEIQALSETQNQLNALLNIQKSTISLATDLKTKTDQRKTSHAQANAAKQEQAALKTHL
KELSTSAKNAIERGKTIANIEKEIERLNTEIAANSVYENAQKQTQNLEAKFKSSQANHLA
SKAKLENAQTELDVAEQALANVQALHLASKLKHGDNCPVCGSKDHPKLAKGDASSQGLDT
AFRAAEKAYKIAGEEERKANDALIADKANYNSSLELFSKLEKPKTESDALKSALHDHSIE
LKKLNDLPTLEAINQKISLIEREEIEVSNRLETILVEHEKNQLAHNTAQSRYDDAIAKIP
TDYQTVGKLEKELETNKSKIDGFKKELENAEISERETASILSNAQTSLNDKQETENRALK
RVNSETANFESALIEAKLDEASFQAAKLLFPKRDAISKAVENHSAALISVKTRIEQAKLA
TQNVQREDLTILQHQVSTAETEVDHASNILNTVTQRQLHLKTTLESVQKATQELNKLNAE
YAPLGEMSDLTNGTNPYKLKLVDFAIAAMYDDVLDAANQRLGPMTDSRFELRREAGGQGG
NASRGLDTLIFDAHTESLRATSSLSGGEGFLASLALALGLSDVVQQQSGGVRLDAIFIDE
GFGSLDSAALDLALQTLHTLADNNRLVGIISHVEEVKRTIPNGFSIEPSTAGSHIKLRTT
TY
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctattcgattgacattacaagcatttggcccttttgccggcaaagaagttatc
aatttcgaacaaacattcgatgtcggtttgtttggtatttatggtccgaccggtgctggt
aaaacatccatatttgatggtttatgctttgctttatttggacaatcatcaggtgcgcaa
cgtgatggaaaagattttcgatcagaccacgccccattggatatgctcactgaagtcgaa
ctcgtatttgatctaggagataaacgctatgtcgtgcgccgtatccctgctcaggagcgt
ttggcaaaaaaaggcggcaagacaacccagcaattgcatcaagcatggctctttgatgca
agcggtttaaatacccaagacataacagatgctaatcgcggcaaagccattgccgaaaag
aaaacatctgtcgttgagcaaactatctctgaattacttggctattccgcagatcaattt
cgtcaaattattttattgccccaaggccaatttcgtaaagttttggatgccaataccaaa
gaccgttcccagattttgcgccaattatttgacgtctccttatatgaaaagcttcaagac
aaactaaaagaagaagccaaagctctacatgaaaaagtgaacacagcccgcattcgcagg
gatgaccgcttaatgcaaagtggccacgaaacatttgaagctttagagctggcaatcaaa
gaagctcacgaacaggtcaaaaaatcccaagccgcattagatgccgccaagaaaaaccat
tcaacaaaacgcgacactctcgaaaaagccaaatccaatgatgcccgttttgtggaatta
gaaaaagcaaaagctgacctcattactttgcaagccaatcaatcagatattgatgcccgc
aaagcagatttggaaaaggtaagacgcgctgaatctttattgggtttagaagctggatta
tcgcgtgcgaaacttgatcacaaagaagcgtcccaaagacaaattgaagcaaaagttaac
cttgaaaaagctgaaaaagcaaacgcatctgctaaagtaaaacttacagatattcaaaag
caaacctctgagattcaagccctatcagaaacccaaaaccagctaaatgctttgctgaat
atccaaaaatcgacgatctctttagccacagatctaaaaacaaaaaccgatcaacgcaaa
accagccacgcgcaagcaaatgcagccaaacaagaacaagctgcgttaaaaacgcactta
aaagagctgtctaccagcgcaaaaaacgccattgagcgcggcaaaacaattgcaaatatt
gaaaaagaaattgaacgcctaaacactgaaatcgctgctaactcagtctatgaaaacgcg
caaaaacaaacccaaaatcttgaagccaaatttaaatccagccaagcaaatcacttagct
tcaaaagcaaaactagaaaatgctcaaacagaattagatgtcgctgaacaagcattagct
aatgtgcaagcactacatctcgcctcaaaactaaagcatggtgataattgtcccgtttgt
ggcagcaaggaccaccccaaactagcaaaaggtgatgctagttcacaaggattagatact
gcatttagagcagcagaaaaagcatataaaattgctggcgaagaagagcgaaaagcaaat
gatgctttgatagccgacaaggccaattataattcttcattagaactattttccaaattg
gaaaaaccaaaaactgaatctgacgccctaaagtcagccctgcacgatcattcaatcgaa
cttaaaaaactaaatgatttgccgacgcttgaagccatcaaccaaaagatatccctcatt
gaaagagaagaaatagaagtttcaaaccggcttgagacaattttagttgaacatgagaaa
aatcaacttgcgcacaacaccgcgcaatctcgatatgatgatgctatcgccaaaataccc
acagattatcagacagtcggcaaactagaaaaagagctagaaaccaataaaagcaaaatt
gatggtttcaaaaaagagctagaaaatgccgaaatatcagaacgtgaaactgcatctatt
ttaagcaacgcgcagacctctcttaatgacaaacaagagacagaaaatcgcgcactcaaa
cgcgtaaactctgaaacggcaaattttgaatcggcattgattgaagcaaaacttgatgaa
gcttcatttcaagccgccaaattattattcccaaaacgagatgcaatttcaaaagctgta
gagaaccattccgccgcgctcatttcggtcaaaacacgcattgaacaagcaaagctcgca
actcaaaatgtgcaacgtgaggatctcacgatacttcaacaccaagttagcactgcagag
acagaagttgatcacgcatccaacattttaaacacagtaactcaacggcaattgcactta
aaaacgacactcgaatccgtgcaaaaagcgacgcaagaattaaataaactcaacgcagaa
tatgcaccattgggtgaaatgtctgacctcacaaatggtacaaacccctataaattaaag
ctggtcgatttcgccattgctgccatgtatgatgatgttttagatgccgccaatcaacgt
ttaggcccaatgacggatagtcgatttgaattacgccgagaagctggcggacaaggcgga
aatgcttctagaggtttggatacattgatatttgatgcacataccgagagtttacgcgcc
acctcatctctgtctggtggagaaggatttctcgcttctcttgccttggcattaggcttg
tcagatgtggttcaacaacaatctggcggtgtccgtcttgatgccattttcattgatgaa
ggctttggcagcttagattccgccgcgttagaccttgcacttcaaacacttcacaccttg
gcagacaataaccgccttgttggaataatatctcatgttgaagaagtgaaacgcacaata
ccaaatggattttctattgaaccttctacagctggtagccacataaaattgcgcacaaca
acctattag
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