Hirschia baltica: Hbal_0085
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Entry
Hbal_0085 CDS
T00945
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
hba
Hirschia baltica
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hba03016
]
Hbal_0085
Enzymes [BR:
hba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Hbal_0085
Transfer RNA biogenesis [BR:
hba03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Hbal_0085
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ACT57787
UniProt:
C6XKV8
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All DBs
Position
complement(81620..82159)
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AA seq
179 aa
AA seq
DB search
MSYRLFAALPIPDHISEMLKSMQNGLDGAKWRHKENFHLTLNFYGNVEDHTAHDLDAALA
TINLPPITLRLKDVGQFGGFDPHTLWAGVEANEHILKLASKCKRPTRELKLHTDKHTYIP
HVTLAYLKNIPPHIVSEYLQRHAMFETPEFTIDRFALYSSRPGKHQSLYEEEASYPLLE
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatagattatttgccgctctccctattcccgaccatatatccgagatgctcaaa
tccatgcaaaatgggttggatggcgcaaaatggcgacacaaagaaaattttcatctcaca
ttgaatttttatggaaatgtcgaagatcacaccgcccatgatttagatgcagcactcgcg
acgattaacttacctcccataacactgcgcctaaaagatgttggccaatttggtggattt
gatccgcacacgctttgggctggcgtagaagccaatgaacacattctaaaactcgccagc
aagtgcaaacggcccacaagagagctcaaactccatacggataaacacacctatatcccg
catgttacactggcttacctaaaaaatatccctccgcacatcgtcagcgaatatctgcaa
cgtcatgccatgtttgaaacgccagaattcacaatcgacaggtttgcactctattcatca
cgcccgggaaagcatcaaagtctgtatgaagaagaagcatcctacccattgcttgagtga
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