Hirschia baltica: Hbal_0422
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Entry
Hbal_0422 CDS
T00945
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hba
Hirschia baltica
Pathway
hba03420
Nucleotide excision repair
hba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbal_0422
03430 Mismatch repair
Hbal_0422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_0422
Enzymes [BR:
hba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Hbal_0422
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbal_0422
MMR (mismatch excision repair)
Other MMR factors
Hbal_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_16
AAA_22
AAA_11
DUF3553
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACT58124
UniProt:
C6XMI1
LinkDB
All DBs
Position
complement(456546..458927)
Genome browser
AA seq
793 aa
AA seq
DB search
MSHSDDFDNLPISQRAMARPPSAPARDADYLDGLNAEQRDAVETTDGALLVLAGAGTGKT
RVLTTRLAHILNQRKAWASQTLTVTFTNKAAREMRERAEKLIGDEAQSLSWLGTFHSVSS
KILRRHAEIVGLESNFTIIDTDDQLRLLKQIIEAENIDTKRWTPRFMAGLIDGWKNRAVT
PDKVPAGEGHEFANGRGIEIYKTYQHRLRVLNACDFGDLLMHCIAIFQKSPDILADYHKR
FKYILVDEYQDTNVAQYLWLRLLAQGTGNICCVGDDDQSIYGWRGAEVDNILRFEKDFPG
AKVIRLERNYRSTAKILACASHLITANQDRLGKTLHTEDEDGDAVKVRGLWDGEAEARLI
GEDIESWRSSGRKYAECAVMVRASWQMRLFEERFIMLGIPYKVIGGPRFFERAEIRDAMA
YLRLIRSENDDLAFERVVNQPKRGVGATSIQKIQVVAREMERPLTVTAEIMLRGNEIRGK
AQTGIRAFLNDLERWRAQAREMEHPRIMEIILDESGYTAMLKADKTPQAQTRLENLKELV
RAMGEFESLNAFMEHVELVMDASQGNESDDQVQILTLHGAKGLEWPQVFLPGWEEEVFPS
KRAIDEGGIKSLEEERRLAYVGITRARERCYISFVANRMIFGRWQSVMPSRFVDELPPEH
VDAVSETGYSAAPDGLNSAGFGGVSRFDSDESFGGSTYESPGWKRAQAARNTTDGRAQYG
NWPQKKRPPDINPSGRLTATSDPEAASGLKLGQRVFHIKFGYGKIKQIDGTKLTVDFEKA
GVKKVVEKFVEAA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagccattcagacgattttgataatctacccatttcccagcgcgcaatggcgagaccg
ccgagtgcgcctgcgcgagatgccgattatctggacgggctaaatgccgaacaacgcgat
gctgtggagacaaccgacggtgctttattggtattggcgggtgcaggaacaggaaaaacc
cgtgtattaacaacacgtttggcgcatattctgaaccaacgcaaagcttgggccagccaa
acactgaccgtgacttttaccaacaaagccgcgcgagaaatgcgcgaacgggctgaaaaa
ttgattggtgatgaagcccaatctttgagttggctggggacatttcactctgtttcgtcg
aagattttgcgccgtcatgcagagattgtggggctggaaagcaatttcaccattatcgac
acggatgaccaattacgccttttaaaacaaatcattgaagccgaaaacatcgacacgaag
cgctggactccgcgctttatggcggggctgattgatggctggaaaaaccgcgctgtgacg
ccggataaagtgcctgctggtgaagggcatgaatttgccaatgggcgcggcatagaaatt
tacaagacatatcaacaccgtttgcgggttttgaatgcatgtgattttggcgatttgctg
atgcattgtatcgcgattttccaaaaaagccccgatattctggccgattatcacaagcgt
tttaagtatattctggtcgatgagtatcaagatactaacgtggcgcagtacctttggtta
cgacttcttgcgcaaggaacgggtaatatctgttgtgttggtgatgatgatcagtcgatt
tacggttggcgcggcgcggaagtggacaacatattacgatttgagaaagatttccccggc
gcgaaagtgatccggcttgagcgcaattatagatcgaccgcaaaaatcctcgcctgtgcc
tcgcatttgattacggccaaccaagaccggcttggcaaaacattgcacacagaagacgaa
gatggcgacgcggtgaaagtgcgcgggctttgggatggcgaagctgaggcgcgcttgatt
ggggaagatattgaaagctggcgctcatctggccgcaaatatgcggaatgcgcggttatg
gtgcgggcctcatggcagatgcgtctgtttgaggaacgcttcatcatgctgggcattcct
tacaaggtgattggtgggccgcgctttttcgagcgggctgaaattcgcgatgcgatggcg
tatctgcggctgatccgatctgaaaatgatgatttggcatttgagcgcgtggtcaaccag
cccaaacgcggcgttggcgcaacctcaatccagaaaatccaagttgtggcgcgggagatg
gaacgccccctcaccgtgaccgccgagattatgctgcgcggcaatgagatacgcggcaag
gcgcaaacaggtattcgggctttcctgaatgatttagaacgctggcgggcgcaggcgcgg
gaaatggagcatccgcgcattatggaaatcatccttgatgagagcggctataccgccatg
ctgaaggccgacaaaacaccccaagcgcaaacccgcctagaaaacctcaaagagcttgtg
cgggctatgggtgaatttgaaagcctgaatgcatttatggagcatgttgagctggtgatg
gatgcatcacagggcaatgaatccgatgatcaggtgcaaattctgacgctgcacggggcc
aaagggctggaatggccacaagtgtttttgccgggttgggaggaagaggttttcccatcc
aaacgggccattgatgaaggcgggataaaatcgctggaagaagagcgccgccttgcctat
gtgggcattacgcgcgcgcgggagcgttgctatatatcctttgtggccaaccgcatgatt
tttggccgctggcaatctgtgatgccgtctcgttttgtggatgaattgccgcctgaacat
gtggatgccgtctcggaaacgggatattcggctgcgcccgatggcttgaatagcgcggga
tttggcggggtaagccgatttgatagcgatgaaagctttggtggctccacctatgaaagc
cccggctggaaacgcgcccaagcggcccgcaacacaaccgatggcagagcccaatatggc
aattggccccagaaaaaacgcccgccggatatcaacccatcaggccgcctcaccgccaca
tcggaccccgaagcagcctctggcctgaagctgggccaacgcgtcttccacatcaaattt
ggctatgggaaaatcaaacaaatcgacggcaccaaactcaccgtcgactttgaaaaagcc
ggcgtgaaaaaggtggtcgaaaagtttgttgaggcggcttag
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