Hirschia baltica: Hbal_0994
Help
Entry
Hbal_0994 CDS
T00945
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hba
Hirschia baltica
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hba03009
]
Hbal_0994
Enzymes [BR:
hba01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Hbal_0994
Ribosome biogenesis [BR:
hba03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Hbal_0994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ACT58688
UniProt:
C6XQT2
LinkDB
All DBs
Position
1067326..1068852
Genome browser
AA seq
508 aa
AA seq
DB search
MSERRETGRKPKSTQSTNRPAEKSVQSPDWSKGERIAKWLAAAGVCSRREAERLIEEGLV
AVNGQVLDSAAFKVTGNEKITVEGKRVGGPDKTRLWRFHKPKGLVTTNSDPEGRPTVFEH
LPKKLPRVMTIGRLDLNTEGLLLLTNDGELARTLELPTTGLKRCYRARAFGKITQAELDK
LQEGVLFEGVVYRSIIATLDKTKGDNNWIDMTLTEGKKREARRALESVGLIVNRLIRVSY
GPFELGDLVEGGVAEIPAGELLSEFGDSISRKRRPDPASVPQSYLEPDTKRRRTKGRDED
TSQTAPAKKPAATIKPLRGEKFEKPSSGREPAQRSHKRQTPHRYAALREGAETNPEPRDF
SKPAKPGEAVVPASLAKTRKTTAPRKEADAVWITEADGTRRELPQRPKTAGSRRDRARAK
GNTAHPTKEDVVRPRSLSERRQEKKGKTSSGEIGSRGDGGLPWNERAGATRGKPRPAGVR
PAPKRGGSSSKTDRFNKGGKSGGPKGRR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgtcgcgagacgggccgtaagcccaaatctactcaatcaacaaacaggcct
gctgaaaaatcagttcaatcaccagattggtccaaaggcgaacgcattgcaaagtggcta
gctgctgctggtgtgtgttcacgccgagaagctgagcgccttattgaagaagggctcgtg
gctgtaaatgggcaggtgcttgatagcgctgcttttaaggtaaccggtaatgaaaaaatt
acggttgaaggtaagcgtgtaggtggtccagataaaacacgtctctggcgctttcataaa
cccaaaggccttgtgacaacgaattcagaccctgaagggcggccaactgtttttgaacat
ctgccgaaaaagcttccgcgcgtgatgacgattgggcgattggacctgaatacagaaggt
cttttattgctgacaaatgatggcgaattggcgcgtacgcttgagttaccaacaacaggt
ttgaagcggtgttatcgtgcacgcgcctttggtaaaatcacgcaagctgagctagataaa
cttcaagaaggtgtgttgttcgaaggcgttgtatatcgctctatcattgcaactttggat
aaaaccaaaggtgacaataattggattgatatgacactgactgaaggtaagaaacgcgaa
gcgcgtcgtgccttggaaagtgttggcctgattgtgaaccgcttgatccgtgtatcttac
ggtccctttgaattgggtgaccttgttgaaggcggcgtagcagagataccagctggcgaa
ttattgtctgaatttggtgatagcatatctcgtaaacggcgccctgatcctgcaagtgtg
cctcaatcctatttggagccagatacaaagcgcaggcgcacaaagggacgtgatgaagat
acttcacaaacagcacctgcaaagaagcctgctgcaacgataaaaccattgcgtggtgaa
aagtttgaaaagccaagctcaggaagagagccagcgcagcgttcgcacaaacgtcaaaca
ccgcaccgttatgcagcattgcgcgagggggccgagactaatcctgagccgcgtgatttc
agcaaaccggctaaaccgggcgaagccgttgtgccagccagtctagctaaaacgcgtaag
acgacggcaccgcgtaaagaggcagatgcagtttggataacggaagcggacggaacaaga
cgtgagttgccgcaacgccctaaaacagctgggtctcgccgcgatcgcgcaagagctaag
gggaatactgcgcacccaactaaagaggatgttgtgcgtccacgttctttaagcgagcgt
cgtcaggagaaaaagggtaaaacaagctccggtgaaattggctctcgcggtgatggtgga
ttgccttggaatgagcgtgcaggtgcgacacgcggaaaaccacgtccagcaggtgtgaga
ccagctcccaaacggggtgggtctagttcaaaaacggatcgtttcaataagggcggaaaa
tcgggcggacctaaagggcgcagatag
DBGET
integrated database retrieval system
