Hirschia baltica: Hbal_1417
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Entry
Hbal_1417 CDS
T00945
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
hba
Hirschia baltica
Pathway
hba03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Hbal_1417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_1417
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Hbal_1417
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Hbal_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
AAA_15
AAA_21
BCA_ABC_TP_C
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACT59108
UniProt:
C6XJ13
LinkDB
All DBs
Position
complement(1481257..1484310)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSTELKSIRVRGAKEHNLKNVDIDIPRNELVVMTGLSGSGKSSLAFDTIYAEGQRRYVES
LSAYARQFLELMQKPDVESIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVG
IPYSPATGLPIQSQTVTQMVDRTMQMEEGTRLYLLAPIVRGRKGEYRKEFADLLKRGFAR
VKVDGEFYELEDPPTLDKKFKHDIDVVVDRIVVRDNMKQRLAESFETALELAEGLAVAEL
ATLEEGETTPKRIIYSSKFSCPESGFTLPEIEPRLFSFNNPFGACPSCDGLGEQLKMSPA
LIVPDHSKTLEGGAIAPWAKSSSPYQIQTLRAISRKYDFKLETPWNKLSKKIQDIILFGT
GTDEVDFVYDDGARRYEVTKTFEGVIPNLERRWRETDSTWVREDIAKYQGSAPCRACDGF
RLKPEALCVKIGDEHIGHITQLSIKNAKTWFDNVESKLSSQQIEIATRILKEIRDRLKFL
NDVGLDYLGLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNERLLET
LRHLRDLGNSVLVVEHDEDAILTADFVIDMGPRAGVHGGEVVAAGTPAEVQANPNSLTGK
YLNGVEEIAIPKRRRWGTRTKKVSLKGATGNNLKNVDVEIPLATFTCVSGVSGGGKSTLI
IETLYKALARKLQNTSAAPAPFESLEGLEHLDKIIDIDQSPIGRTPRSNPATYTGAFGPI
RDWFTGLPEAKARGYKAGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVTCEECNGKRY
NRETLEILYKGKSIADVLDMTVEEAKGFFAAVPGIRNKMETLYRVGLGYVKVGQQANTLS
GGEAQRVKLAKELSRRATGRTMYILDEPTTGLHFDDVRKLLEVLQELVDNGNTVVVIEHN
LDVIKTADWVIDLGPDGGDGGGEIVAVGTPEDIIKIDASHTGRFLKETLERQAERSARQK
EILKAAARAEITASEVADYEADEKLKRKPRAPAKTKAQLAAKTSKAKTTRKKKAPTK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagaactaaaatctatccgcgttcgcggtgcaaaagaacataatctgaaaaat
gtagacatagacattccccgcaatgaacttgtggtcatgacaggattatctggatctgga
aaatcctcattagctttcgacacaatctacgcagaaggccagcgccgctatgtagaaagc
ctatcggcctatgcccgccaatttctggaattaatgcaaaagccagatgttgaatcgatt
gaaggcttgtcgccagccatttccatcgaacagaagacgacatcccgcaatccccgctct
acagttgccacagttactgagatttatgactatatgcgcctactctgggcgcgtgttggt
attccttattcgccagcaacaggtttacccatccaaagccaaaccgtcacacaaatggtt
gatcgcacaatgcagatggaagaaggcacacgcctttatcttctggccccaatcgtgcgc
ggccgcaaaggcgaataccgcaaagaatttgccgaccttttaaaacgtggatttgcgcgt
gtaaaagttgatggtgaattctatgaactagaagatccaccaacactcgataaaaaattc
aaacacgacatcgatgtggtcgttgatcgcatagtcgttcgagacaatatgaaacaacgt
cttgccgaaagttttgaaacagcgcttgaactcgcagagggtttagctgtcgctgaactt
gcaaccttagaagaaggcgaaaccacgccaaaacggatcatttattcatccaaattttca
tgccccgaatctggtttcaccctacctgaaattgaacctcggctattttctttcaacaac
ccatttggtgcatgtccgtcatgtgatggattgggtgaacagctaaaaatgtctccggcc
ttgatcgtgcccgatcacagtaaaacgcttgaaggcggcgcaattgcaccttgggccaag
tcttcatcgccctaccaaattcaaactttacgcgccatatctcgtaagtatgatttcaaa
ttggaaacaccgtggaacaaactttcaaaaaagatccaagacattatcctgtttggaaca
ggcacagatgaagttgattttgtttatgatgatggtgcacgccgttatgaagtcacaaaa
acatttgaaggcgttatcccaaacctagaacgcagatggcgtgaaaccgattcaacttgg
gtgcgtgaagatattgcaaaatatcaaggctcagcaccctgtcgcgcctgtgatggcttc
cgtcttaaaccagaagcactgtgtgtaaaaattggcgatgaacatattgggcacatcaca
cagctttccatcaaaaatgccaaaacttggtttgataacgttgaaagcaagctttcatct
caacaaatcgagattgcgacacgtattctcaaagagatcagggatcgccttaaattcctc
aatgatgttggcttagactatttgggattatcgcgatcatcaggcacgttatcaggtggt
gaaagccaacgcatccgattggccagccaaatcgggtcaggcctaactggtgtcctctat
gttctagatgaaccctctattggtcttcaccagcgagataatgaacgccttcttgaaacc
ctgcgtcatttgcgtgaccttggaaattctgttctcgtcgttgaacatgatgaagatgca
attttgacagcagattttgtgattgatatggggccgcgcgccggtgtgcatggcggggaa
gtggttgctgctggaacgccggccgaagttcaagcaaacccaaacagccttaccggaaaa
tatctaaacggggttgaagaaatcgcaatccccaaacgtcgtcgctggggaacccgtaca
aagaaggtttctctaaaaggcgcaaccggcaataatttgaaaaatgttgatgttgaaatt
ccgttggcaacttttacatgtgtttccggtgtatcaggtggcggtaagtcaacactcatt
attgaaacactgtacaaagcgctcgcacgcaaacttcaaaacacctcggctgcacccgcg
ccttttgaaagcttagagggattggaacatctcgataaaattatcgatattgatcaatca
ccaatcggacgtacgccccgctcaaacccagccacatacaccggtgcctttggtccaatc
cgcgattggttcacaggtctacctgaagccaaagcacgcggatataaagcaggccgtttc
tctttcaatgtgaagggcgggcgctgtgaagcatgtcagggtgatggtgtcatcaaaatc
gaaatgcacttcctgcccgatgtctacgtcacctgtgaggaatgtaacggaaagcgctat
aatcgcgaaacactcgaaattctctacaagggcaaatctatcgccgatgtactggatatg
acggtggaagaagccaaaggcttttttgcggctgtaccgggcattcgcaacaaaatggaa
acactctaccgcgttggcctcggttatgtgaaagttggtcagcaagctaacacattgtct
ggtggtgaagcacaacgcgtgaaactcgcgaaggaattatcgcgccgcgccactggccgc
accatgtatatccttgatgaaccaacaaccggtctacactttgatgatgtccgtaaactt
ttggaagttcttcaagagctggtagacaatggcaatacagttgttgtgattgagcataat
cttgatgtcatcaaaacagccgattgggtcattgaccttggcccagatggtggcgatggc
ggcggtgaaatcgtggctgttggtacacccgaagatattatcaaaattgatgcgagccac
actggccgtttccttaaagaaacactggaacgccaagcagaacgcagtgcgcgccagaaa
gaaattctcaaagcagcagcgcgtgcagaaatcactgcttctgaagtcgcagactatgaa
gcagacgaaaagcttaaacgcaaaccacgcgcacctgcaaaaaccaaagcgcaattggct
gcaaaaacatccaaagctaaaacaacgcgcaagaaaaaagctccaaccaaataa
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integrated database retrieval system
