Hirschia baltica: Hbal_1619
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Entry
Hbal_1619 CDS
T00945
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hba
Hirschia baltica
Pathway
hba03030
DNA replication
hba03430
Mismatch repair
hba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hbal_1619
03430 Mismatch repair
Hbal_1619
03440 Homologous recombination
Hbal_1619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hba03032
]
Hbal_1619
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_1619
Enzymes [BR:
hba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hbal_1619
DNA replication proteins [BR:
hba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hbal_1619
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hbal_1619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ACT59307
UniProt:
C6XJL2
LinkDB
All DBs
Position
complement(1722481..1723377)
Genome browser
AA seq
298 aa
AA seq
DB search
MSGNANLRDLANELEQSGDYRVLKRLVPPLPMNFIGAPFKRGLLIDTETTGLDYREAELI
EIALVPFEYSTEGKLVTFGKALDQFQQPKSPISEEITKLTGITNEMVAGQKIDIPAVEQL
IKESDLIIAHNAAFDRPFAERLTPAFKAKPWACSLVDIDWKEEGYESPKLSFLAMEHGFY
YKAHRADIDCWATIKLLAQRLKTSGDRAMAHLLTSAREERWRIWATNTNFAKKDILKNRG
YRWESGENGKPKSWYADIAAKDKEAELEFLKSEIYDGHLPNIPMIHITALNRFSADLD
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcaacgcaaacttgcgtgatttagcgaatgaacttgagcaatcaggtgactat
cgcgtattgaaaagactcgtcccaccacttcctatgaattttattggtgcccctttcaag
cgaggcctgttgattgatacagaaactaccggtctagattatcgcgaggctgaacttatt
gaaattgcactcgttcctttcgaatattctaccgaaggaaaactggtgacttttggaaag
gcgctagatcaatttcaacaaccaaaatcacctatttctgaagaaatcaccaagcttacc
ggtatcacaaatgaaatggtagcaggtcaaaaaatagatattcctgctgtcgaacaattg
atcaaagaatctgaccttataatcgcacacaatgctgcttttgatcgcccttttgctgaa
cgtttaacacctgctttcaaagcaaaaccttgggcatgttctctggtcgatattgactgg
aaagaggaaggttacgaatctccaaaactctcatttctagctatggagcacggtttctat
tataaagctcaccgggctgatattgactgttgggcgacgattaaattgcttgcacagcgg
ctaaaaacatctggtgacagagctatggctcaccttctaacgagtgctcgtgaagaaaga
tggcgtatttgggcaactaacaccaattttgctaaaaaagacattctaaaaaacagagga
tatcgttgggaaagtggtgagaatggaaaacctaaatcatggtacgctgacattgcagcc
aaagataaagaagcagaactcgagtttctaaaatctgaaatttatgatggtcatttaccc
aacatccctatgatacatattactgctttaaatcgcttttccgccgatctagattag
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