Hirschia baltica: Hbal_1718
Help
Entry
Hbal_1718 CDS
T00945
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hba
Hirschia baltica
Pathway
hba03030
DNA replication
hba03430
Mismatch repair
hba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Hbal_1718
03430 Mismatch repair
Hbal_1718
03440 Homologous recombination
Hbal_1718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hba03032
]
Hbal_1718
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_1718
Enzymes [BR:
hba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Hbal_1718
DNA replication proteins [BR:
hba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Hbal_1718
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Hbal_1718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
ACT59406
UniProt:
C6XJW1
LinkDB
All DBs
Position
complement(1834965..1838402)
Genome browser
AA seq
1145 aa
AA seq
DB search
MSETTKIASLDKPRFVHLRVRSALSLLGSMITIKKLCKWTFENGFPAVAITDDNNMFGAL
ELSETLAPMGVQPIIAITLHIYDRINPAAEPTELALFAQNEAGYKNMMILTTKGFLESPS
GGTGVYLDDVLEHSEGLICTTGGGNGEVTQLCAAGDEEGAREYLLKLNEAFPNRLYVELQ
RHGRLTEDKAEELLVDLAYELDLPLVATNEARFIKRAQHKAHDALLCIAGSTYVSVQDRP
KASPEQYMKTEEEMINLFSDLPEAIENTCEIARRCSYRPAWRKPILPNFTGDDGDEGEEL
DRQAREGLKMRLSSGILYEEEQVYWDRLDFELNIIRQMGFPGYFLIVSDFIKWAKEHDIP
VGPGRGSGAGSLVAWVLTITDLDPLRFGLLFERFLNPERVSMPDFDVDFCQDRRHEVIEY
TKRKYGADRVAMIITYGTLQAKAVIRDVGRVHQLPFGQVDKLSKLIPFNPANPPTLQEAI
DGEPKFKQEMRENEDVRNLVETALELEGLYRNAGTHAAGVVIGDRPLVELSPLYKDPKSD
IPATQFNMKWAEHNGLVKFDFLGLKTLTVIQRALKFVISEGKQLTEKWHTFDDEEAYKLL
SSGETLGVFQLESTGMRDTLRKVKPDCIEDIIALISLYRPGPMKNIDTYVARKEGREEID
YLHDDLKPVLEETYGVIVYQEQVMRIAQILAGYSLGEADLLRRAMGKKKPEEMLKQKVRF
LEGAAKKDVSKERAEFIFELVNEFAGYGFNKSHAAAYAVIAYQTAYLKAKHPVEFLAGSM
SLDLTNTEKLAAFFQETKRLKIPVVTPDITLCNADFDVRDQKIYYALGAVKGVGKEAMLD
VERARNEKPFEDLFDFAERVDPRQINKRVYQALSKCGGFDQLEKNRAKAFEASEMLAAMS
NAANRDRNSNQNSLFGDEPPMRPKLPKAAPWSSEKILDYELSSVGFYLSGHPLDDILEGP
ARERIVLSSQMMELGRERAALEMIGVVKVRVEKPSMSGGGKFAYITLSDPSGEYELFVAP
ETLAETRDYFEVGSRVNVHVKVRRKDDELRFSVDGARPLDKAALGAPAKLCVRVGDLASM
EQLAHVAVQLREVSSQTIGIIQVEIPLEDQRLITLELDGHYPMDYAAMSALKSVVGVERV
TPVAA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactactaagattgctagtttggataagccccgttttgtgcatcttcgggtg
agatcggcattgtcgcttcttggttcaatgatcacgataaagaagctctgcaaatggaca
tttgaaaacggttttccggctgttgcgatcaccgatgacaataacatgtttggtgctttg
gagttgtcagaaactttagcgccaatgggtgtgcaacccattattgcaataacactgcat
atttatgacagaataaaccctgctgctgaaccaactgaattagcattatttgcccagaat
gaagctgggtataaaaatatgatgatcctaacgactaagggatttttggaatcgcctagt
ggcggcacgggcgtatatctcgatgatgtccttgagcacagtgagggtttaatttgtaca
acaggtggcggaaatggtgaagttacccaactttgcgcagctggtgatgaagaaggtgcg
cgtgagtatttacttaaattaaatgaagcttttccaaaccgattatatgttgaactgcag
cgtcacggacgtttgactgaagataaagcagaagaattattggtagatttggcttatgag
cttgatttgccattagtggcgacgaatgaggcgcgtttcatcaaaagagcgcagcacaaa
gcgcatgatgcattgctatgtattgcaggctctacatatgtttcagtgcaggatcggccc
aaagcgtctcccgagcaatatatgaaaacggaagaagagatgattaatctcttttccgac
ctgccagaagcaattgaaaatacttgcgagattgcgcgccgctgttcttatcgccccgct
tggcgaaaacctattctacccaattttacaggtgatgatggagacgaaggagaagagttg
gaccgtcaagcgcgagaaggccttaaaatgcggctttcatcgggtattttatatgaagaa
gagcaggtctattgggataggttggactttgagctgaacataattcggcaaatgggtttt
cctggatatttcttgatcgtttctgattttattaaatgggcaaaagagcatgatattccg
gttggccctggtcgtggttctggtgccggttcccttgtcgcttgggtattgacgatcact
gatttggatccactgcgatttgggctgcttttcgaacgttttttgaaccctgaacgtgtg
tctatgcccgatttcgatgtcgatttctgtcaagatcggcgacatgaggtgattgaatat
accaaacgaaaatatggtgcggatcgtgtggcgatgatcatcacttatggtacattgcaa
gcaaaagcggttattcgcgatgtgggccgtgtacatcaattgccgtttggtcaagttgat
aaactttcaaagcttattccttttaatcctgcaaaccctcctacgcttcaagaagcgatt
gatggagagccgaaattcaagcaagaaatgcgggaaaatgaagatgttcgcaatcttgta
gaaacagctttagagcttgagggattgtacaggaatgctggaacgcacgccgctggtgtt
gtgatcggtgaccgaccacttgtagagttatcgccgctctataaggatccaaaatcagat
attcctgcgacacaattcaatatgaagtgggctgaacacaacggattggttaaatttgac
tttcttggtctaaaaactctgaccgttattcaaagagcacttaaatttgtgatttcagaa
ggcaaacagctcacagaaaaatggcacacttttgatgacgaagaggcttataaattgctc
tcttcaggtgaaacacttggcgtatttcagcttgaatcaacaggtatgcgggatacgctt
cgcaaggtgaagccggactgtatagaagatattatcgcgcttatttcgctttatagaccg
ggcccgatgaaaaacatcgacacctatgttgcgcgtaaagaaggtcgtgaagaaatagat
tatctccatgatgacttgaaacctgttctagaagaaacatacggggttattgtgtatcag
gagcaagttatgcgcattgcgcaaatacttgcggggtattcattgggtgaggctgacctt
ttgcgtcgcgccatgggtaagaaaaaacctgaagagatgctgaaacagaaggtgcggttt
ttggaaggtgctgcgaagaaagacgtatccaaagaacgagcggaattcatttttgaattg
gtgaatgagtttgctgggtatggtttcaacaaatctcacgctgctgcctatgctgtaatc
gcttatcaaacggcttacctgaaagctaaacaccctgtcgagtttttggctggatcaatg
agtctcgacctaacaaataccgaaaaactggctgctttctttcaggaaaccaaacgttta
aaaattccagtcgttacgccagatattaccttgtgtaacgctgattttgatgtgcgagac
caaaagatttactatgcgttaggagcagttaagggcgttggtaaagaagcgatgctggat
gttgagcgcgctagaaatgaaaagccattcgaagatttgtttgactttgctgaacgtgtt
gatccgcgtcaaatcaataagcgcgtctatcaagcactctctaaatgtggaggtttcgac
caattagagaagaacagagctaaagcttttgaagcgtccgaaatgcttgcagcaatgtct
aacgcggccaatagggatagaaactcaaatcaaaatagcctttttggtgatgaacctccg
atgagaccaaaactacctaaagctgcaccgtggagttcagagaagattttggactatgaa
ctttcaagtgttggattctacctttctggtcaccctctcgatgatattcttgaagggccg
gctagggaaagaattgttttatcttctcaaatgatggagttaggcagggaacgtgcagca
cttgaaatgataggagttgtcaaagtacgcgttgaaaagccttctatgagtggaggtggg
aaatttgcttatatcactttatcagatccatctggggagtatgagttatttgttgcccct
gaaacattggccgagactcgagattattttgaagtaggaagtcgggtcaacgttcacgtc
aaagtgcgccgaaaagatgatgagttgcgtttctctgttgatggtgcgcgcccactcgac
aaagctgcactcggagcaccagcaaaattatgcgtgagagtaggtgacctagcgagtatg
gagcaacttgcacatgtcgctgttcagttgagagaagtgtcttctcaaactatagggata
attcaagttgaaattcctttagaagatcaacggttaatcacgcttgagttggatgggcat
tatcccatggattatgctgctatgtcagctttgaaatcagttgtcggagtggagagagtc
acgcccgtggccgcataa
DBGET
integrated database retrieval system
