Hirschia baltica: Hbal_1862
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Entry
Hbal_1862 CDS
T00945
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hba
Hirschia baltica
Pathway
hba03410
Base excision repair
hba03430
Mismatch repair
hba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hbal_1862
03430 Mismatch repair
Hbal_1862
03440 Homologous recombination
Hbal_1862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_1862
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Hbal_1862
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Hbal_1862
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Hbal_1862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Nitroreductase
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
ACT59548
UniProt:
C6XKA3
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Position
complement(1998170..1999999)
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AA seq
609 aa
AA seq
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MSRSPFLDPSQDLDVEDTGPAFLGVEHSLTGRRWRVRPVDDEKATEISRRLSKPDLIGKL
LAGRGVTLDEADTYFSPTLKALFPDPSSFADMDAACEVILEALVSGRKCAVLADYDVDGG
TSAAILTKYFKAWDRELILYVPDRLTEGYGPSVEAFESLKEQGAELVMTVDCGAAAVEAL
EAAHSLGLDVVVLDHHLMQSEPPPAAAVVNPNRPDCKSGCGHMAAAGVVFVLTAGLNRLA
RQKSVAPAGGLPDPMKWLDLCALGTLCDMAPLKGVNRAFVNAGLKVLQRMDNVGLAALSQ
VSGVEAPKSVYHATFLLGPRLNAGGRIGDPWIAAKLLATEDRKEALALAERLQALNEARK
EIEAEILDEATRIAESRLVEKPDAGAIVVGGEGWHPGVIGIVAGRLKEKFHRPTIVIGWG
EELGPVAKGSGRSVAGVNLGNLIAKASKEGIILSGGGHAMAAGLSLEPSQLEAFRDYMEE
STAEAKKELEQARVLELDGLLSPASADGELLLSVDGAGPYGAGSPEPIFAMANVRSHNVR
RVGVDHLSFEILGEDGGKLRAIAFRAADADLGQAILSGQMMHLAGKLKPDEWRGAGKVQF
EVSDGFFSK
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttccccattccttgatccgtcgcaagaccttgatgtcgaagatactgggcca
gcttttttgggtgttgagcattctttgacagggcgacgatggagagttcggcctgttgat
gatgaaaaagccactgaaatttcgcgcagactctctaagccagacctgattgggaagcta
ctggctggtcgaggggtgactttggatgaggctgatacttatttttctccaactctgaag
gccctttttcctgatccttctagctttgctgacatggacgctgcttgcgaagtgatatta
gaggcattggtgagtggccgaaaatgtgcggtgcttgcagattatgatgttgatggtggt
acgtcggcggcaattttgacgaagtatttcaaagcttgggaccgagagctgattttatat
gttccagaccgcctaacggagggctatggcccttctgtggaagcgtttgaatcgctaaag
gaacaaggcgcagagcttgttatgactgtggattgtggagctgctgctgtagaagcacta
gaggcagcgcatagtctgggtttggatgttgtggtgcttgatcaccatttgatgcaaagt
gagcctccccctgcggcagctgttgttaatcccaaccgacctgattgtaagtcaggttgc
gggcatatggcggcggcgggagttgtgttcgtccttacagcgggattgaataggttggcg
aggcaaaagtcagtggctccagctggtggtttgcctgatccaatgaagtggctggacctt
tgcgcattaggtacattgtgtgacatggcaccgcttaagggcgttaacagagcatttgta
aatgcgggcttgaaggttttgcaacgcatggacaatgttggattggcagctttgtctcaa
gtatcgggcgttgaggcccctaaatccgtttatcacgcgacttttctacttggtcctagg
ctaaatgcaggcgggcgaatcggtgatccttggattgcggccaaattgcttgcgactgaa
gacagaaaagaagcgcttgcattagctgaacgacttcaggctctaaacgaagctagaaaa
gaaattgaagctgagattttagatgaagcaacacgaatcgccgaatcacgtctagtcgaa
aaacctgatgcaggtgccatagttgtgggcggcgagggatggcacccaggcgttatcgga
attgtggcgggacgtttaaaagaaaaatttcataggccaacaatcgttattgggtgggga
gaagagcttggccctgttgcaaaagggtctggtcgttctgtggctggtgtaaatttaggg
aatttgattgctaaggcgtctaaagagggaatcattctttcaggaggtggtcatgctatg
gcggcgggattgtcacttgaaccttcccaactggaagcttttcgagattatatggaagag
agcacagctgaagctaaaaaggaattagagcaggcgcgtgttctggagcttgatggatta
ttgtctcctgcgtcagcggatggagaattattgctctcagtggatggggctggaccatat
ggtgcaggttctccagagccgatatttgctatggcgaatgtgcggtcacacaatgtgcga
cgtgttggagtggaccacttaagctttgaaatattaggagaagacggtggaaaacttaga
gcaatagcgtttcgagctgcagatgctgatcttggccaagcgattctttcggggcaaatg
atgcatttggccggtaagttgaagcctgatgagtggagaggagccggaaaagttcagttt
gaggtgtcagatggttttttttctaaataa
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