Hirschia baltica: Hbal_1988
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Entry
Hbal_1988 CDS
T00945
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hba
Hirschia baltica
Brite
KEGG Orthology (KO) [BR:
hba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hba03032
]
Hbal_1988
03400 DNA repair and recombination proteins [BR:
hba03400
]
Hbal_1988
Enzymes [BR:
hba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Hbal_1988
DNA replication proteins [BR:
hba03032
]
Prokaryotic type
DNA Topoisomerases
Hbal_1988
DNA repair and recombination proteins [BR:
hba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Hbal_1988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
ACT59672
UniProt:
C6XL73
LinkDB
All DBs
Position
2139597..2142194
Genome browser
AA seq
865 aa
AA seq
DB search
MQVVVVESPAKAKTINNYLGKDYIVLASYGHIRDLPSKDGSVDPDADFAMKWEGDSKSNK
RIKDIADALKGADGLILATDPDREGEAISWHVLDVLSKKRGLMKDKKIERVVFNAITKKS
ILEAMQNPRSLDQELVDAYLARRALDYLVGFNLSPVLWRKLPGSRSAGRVQSVALRLICE
REVEIEAFKPEEYWTIKGLMDSVSKTEFEARLYELEGKKTQKFSFPNKEAADKALEVVRV
GGYTVQSVEAKPVKSNPPPPFTTSTLQQEASRKLGFNASRTMGAAQKLYEAGLITYMRTD
GVEMAQEAIHAARDAIKERYGAPYVPSSPRIYTSKAKNAQEAHEAVRPTDFLKHPSEVRL
EADLQRLYDLVWKRAVASQMATAQLERTTADLKSKDGQAILRATGQVVKFDGFLTLYQEG
KDDANGDEDAKRLPAMSVGDVIDLKKADANQSFTQPPPRFTEASLVKKMEELGIGRPSTY
ASTLATLRDRDYVEMDKNRFVPADKGRLVTIFLENYFNQYVQYDFTAELEEKLDLVSDGK
LEWKVFLAEFWKQFSLKIAEVMELRVTNVLDLLNDVLGPKIFPPKLDEKTGEPTGEDPRL
CPLCKEGQLSMKLGRNGAFIGCSNYPECKHTRPFTTDGSDAEDAVSPDGKLLGQDPETGK
DISLRTGRFGPYVQLGEGIGKEKPKRGSIPKGWKADELTLAQAIQLINLPREIGPHPEDG
EMMYANFGRYGPYVQHQKTYANLPDPMDVFEVGLNRAVALIAEKNAKGGRGGAAKALKEL
GKHPDTDEPINVFDGRYGPYVKHQKTNATLPKDLTPETITLEKAIELINAKAGASKKKAP
AKKKAPAKKTAAKKAPAKKAPASDS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcgtcgtcgtagagtctcccgccaaagcaaaaaccatcaacaactatctcggc
aaagactatatcgtgctcgcctcatacgggcatatcagagaccttccttccaaagatggt
tcagttgatccagacgctgattttgcgatgaaatgggaaggtgattccaaatccaacaaa
cgtatcaaggatatcgccgacgccttaaagggagccgatggcctgatactcgccaccgac
cctgatagagagggtgaagctatttcatggcacgtattggatgtcctttccaaaaaacgc
ggcctaatgaaagacaaaaaaatcgagcgcgttgtttttaatgcgatcaccaaaaagtct
atccttgaagccatgcagaacccaagaagcctcgatcaggaattggtagatgcatacctt
gcccgtcgtgccttggattaccttgttgggttcaacctgtctccagttctctggcgcaaa
ctccccggctcccgttctgctggccgcgtacaatcggttgctttgcgcttgatttgtgaa
cgtgaagtcgagattgaagcctttaaaccagaagaatactggaccattaaaggcttgatg
gattctgtatcaaaaacagaatttgaagcacgcttatacgaacttgaaggcaagaaaact
caaaaattctcattcccgaataaagaagcagccgataaagctctcgaagtcgtgcgcgtt
ggtggctacacagttcaatctgtcgaagccaaacctgtaaaatcaaacccgccaccgcca
tttacaacatcaacgcttcaacaagaagcctcgcgtaaactcggtttcaacgcgtcgcgc
acaatgggcgcagctcaaaaattgtacgaagctggtctcatcacatatatgcgtactgat
ggtgttgagatggctcaagaagccattcacgcggctcgcgatgccattaaagagcgttat
ggtgcaccttacgtgccttccagtccgcgcatttacacatccaaagccaaaaacgcgcag
gaagcacacgaagccgtccgtccgacagatttcttaaaacacccgtcggaagtgcgttta
gaagcagaccttcagcgcctctacgatcttgtctggaaacgtgcagtcgcatctcaaatg
gcaacagcacagcttgagcgcacaacagccgatctaaaatctaaagatggacaagccatc
ttacgcgcgaccggtcaggttgtgaaatttgatggtttcctcaccctttatcaagaaggt
aaggatgatgccaatggtgatgaggatgccaaacgcctgccagccatgagcgttggcgat
gtcattgatctcaaaaaagccgacgccaaccaaagcttcacacagccacctccgcgcttc
accgaggcatctttggtgaagaaaatggaagaattgggcattggacgcccatcaacctac
gcatcaacattggccactttgcgtgaccgcgattatgtggagatggacaaaaatcgcttt
gtccctgcggacaaaggtcgattggttacaatcttccttgagaactatttcaaccaatat
gttcaatatgatttcacggccgagctagaagaaaaactcgaccttgtttcagatggcaaa
ctggaatggaaagtctttctcgcagaattttggaaacagttcagccttaaaatcgcagaa
gtcatggaattgcgcgtcacaaacgtgctcgatcttctaaatgacgtacttggccctaaa
atcttcccgcctaaactggatgaaaaaactggcgagccaacaggtgaagacccacgctta
tgtccattatgtaaagaaggtcagctctcaatgaagcttggccgcaatggcgcttttatc
gggtgttcaaactatcccgaatgtaagcacacacgcccattcacgacagatggttcagat
gctgaagacgctgtgtcaccagatggcaagctattgggccaagaccctgaaacaggtaaa
gacatcagcctgcgtacgggtcgctttgggccatatgttcagctaggcgaaggcatcggc
aaagaaaagccaaaacgcggttctatccccaaaggatggaaagccgatgaattgacactt
gctcaagctatccagctcatcaacctcccccgtgagatcggtcctcacccggaagatggt
gaaatgatgtatgctaattttggtcggtacgggccttatgttcagcaccaaaaaacctat
gccaatttgccagacccgatggatgttttcgaagttggcctgaaccgcgccgttgcacta
attgcagagaaaaatgcaaaaggtggacgcggcggtgctgcaaaagcactgaaagaactt
ggcaaacacccagacacagatgaaccaatcaatgtgtttgatgggcgctatggtccctat
gttaaacaccaaaaaaccaatgcaactttgccaaaggatttaacacctgagacaattacg
ttggaaaaagcgattgaattgatcaatgcaaaggctggtgcgtcaaagaaaaaagcaccc
gccaagaaaaaagcgcccgcgaaaaaaactgcggctaagaaagctcccgctaaaaaggct
cctgctagcgattcttaa
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