Hyphomonadaceae bacterium UKL13-1: AEM38_00110
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Entry
AEM38_00110 CDS
T04338
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbc03032
]
AEM38_00110
03036 Chromosome and associated proteins [BR:
hbc03036
]
AEM38_00110
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_00110
DNA replication proteins [BR:
hbc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AEM38_00110
Chromosome and associated proteins [BR:
hbc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AEM38_00110
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AEM38_00110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AMS28261
UniProt:
A0A7U5BZE6
LinkDB
All DBs
Position
32922..33218
Genome browser
AA seq
98 aa
AA seq
DB search
MLRSELVAKLATENPHLFHGDVERVVDTVLEEITKALEKGDRVELRGFGAFSVRSRGARQ
GRNPRTGEGVAVDAKHAPFFKAGKELRARLNGGVDPGE
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgatctgaacttgttgctaaattagctaccgagaatccgcatctatttcatggg
gatgtcgaacgtgtggtcgataccgtgctggaagagatcaccaaggcattggaaaaaggc
gaccgcgtcgaattgcgcgggttcggagcattttccgtgcgttcccgcggggcacgtcag
ggtcgcaacccacgcacgggcgaaggcgtggccgtggatgccaagcacgcaccattcttt
aaagcgggtaaggaattgcgcgcccgcttaaacggtggcgtcgatcccggcgaataa
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integrated database retrieval system
