Hyphomonadaceae bacterium UKL13-1: AEM38_01290
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Entry
AEM38_01290 CDS
T04338
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hbc03000
]
AEM38_01290
Transcription factors [BR:
hbc03000
]
Prokaryotic type
Other transcription factors
Others
AEM38_01290
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
MCM
ATPase_2
AAA_22
DUF6213
AAA_33
AAA_30
AAA_19
AAA_2
NACHT
TsaE
AAA_7
AAA_14
T2SSE
TniB
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMS28436
UniProt:
A0A7U4XVY5
LinkDB
All DBs
Position
complement(281342..282928)
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AA seq
528 aa
AA seq
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MRPITVISILGSTLDASPYGPARWQKWRPSVGICMHEELRVDRFLMIHDTAHRRLAEFVS
ADIASVSPETTVERHAVSFKNPWDFEEVYGKLLDFARAQKLDPEAEDYLIHITTGTHVAQ
ICLYLLTEARYLPGRLLQTQPKRGIPDAAGDWSVIDLDLSRYDSIATRFAKESAESTSFL
KSGIETRSRTFNTLIDEIEQVASRTRAPILLMGPTGAGKSQLARRIFELKKLKHQVNGPL
VEVNCATLRGDSAMSALFGHKRGSFTGASADRAGLLRAADGGLLFLDEIGELGLDEQAMI
LRAIEDKRFLPVGADREVHSDFQLIAGTNRDLAQSVAQGRFRDDLFARLNLWTFSLPGLA
ARREDIAPNLDYELDHYAAREGTRVTFNKEARERYLAFAMSHDAAWSGNFRDLAASVTRM
ATFSPKGRIDSDVVATEITRLQRVWTGSTTPTDDLADILSSEELDGLDPFDRVQLAYVVA
TCRTSPSLSEAGRKLFAASRTKRASVNDADRLRKYLGRFGITWDQLAV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgatcaccgtcatcagtattcttggctcgaccctcgacgcctccccctatggc
ccagcgcgctggcagaaatggcggccatcggtgggaatctgcatgcatgaggagttgcgg
gtcgaccgcttcctgatgatccacgacaccgcccatcggcgtcttgctgagtttgtcagc
gccgacatcgcctcggtctcgcctgaaaccacggtcgagcgccacgccgttagtttcaag
aacccttgggactttgaagaggtttatggaaagcttctggactttgcgcgcgcgcaaaaa
ctcgaccccgaggcggaagattatctaatccacatcacgaccggcacgcacgtcgcgcaa
atctgcctctatctgctgacagaagcgcgctatctgccgggccgtttgctccagacccag
cccaagcgcggcatccccgatgctgcaggcgattggagtgtgatcgatctggatttgtcg
cgctatgattccatcgccacccgtttcgcgaaagaaagtgctgaaagcacgtcgtttttg
aaatcgggcattgaaacgcgcagccgcaccttcaacaccctgatcgacgagattgaacag
gtagccagtcgcacccgtgcccctatcctattgatggggccgaccggggcaggcaaaagc
caattggcacggcgcatctttgaactcaaaaaactcaagcaccaagtcaatggccccttg
gtggaggtcaattgcgcgaccttgcgcggcgacagcgcgatgtcggccttgtttgggcat
aagcgaggctcatttacgggcgcatcagccgatcgggccgggctgttacgggccgcagat
ggcgggctgttgttcctcgatgaaattggcgaactgggcttggatgagcaagccatgatc
ctgcgcgctattgaagataagcgctttttgcccgttggggccgaccgggaagtgcacagc
gacttccaacttatcgcggggaccaaccgagacctcgcccagagcgtcgcgcagggccgg
ttccgcgacgacctctttgcgcgcctcaatctctggacattttcgctaccgggcctcgcc
gcgcgacgcgaagatattgcgcccaatctcgactatgagctcgatcattatgccgcgcgt
gaaggcacaagggtgaccttcaataaagaagcacgagagcgctatttggcctttgccatg
tcgcacgatgcggcatggtctgggaacttccgggacttggccgccagtgtcacgcggatg
gcgaccttctcgcccaagggccggattgatagtgacgtcgtcgccactgagatcacccga
ctgcaacgcgtgtggacaggcagtacgaccccgaccgatgatttggccgacatattgtct
tccgaagagctggatggcctagacccctttgatcgcgttcaattggcctatgtcgtcgcc
acctgccggaccagcccgtcactgtccgaggctgggcgcaagctgtttgctgcctcccga
accaagcgggcgagcgtgaatgatgccgatcgactgcgtaagtacctcgggcgcttcggc
atcacgtgggaccaacttgctgtctag
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