Hyphomonadaceae bacterium UKL13-1: AEM38_01630
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Entry
AEM38_01630 CDS
T04338
Name
(GenBank) pectate lyase
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
UPF0444
Motif
Other DBs
NCBI-ProteinID:
AMS30711
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Position
363754..365085
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AA seq
443 aa
AA seq
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MGATSAAVVGLIASPSMAQTIASAAAAKAFPGAVGWAANTVGGRGGQILRVTTLAKDGPG
SFKQAIETKGPRIIVFEVGGVIDLEATTLKITESFLTIAGQTAPSPGITLIRGGLDVAAS
DVIMRHIRVRAGEAGKPKMSGNDFDSFSTIGARNVIVDHCSLTWGTDENLSASGPRFTGK
TPAEWRAGTSRQITYSNNLIAESLANATHAKGEHSKGSLIHDNANDVLIYRNVYAHNVER
NPLFKGGVHGAIINNLIYNPGYRAIHYNLMANEWGAQPFQNGRMTVIGNAMRGGHNTTPG
LPLVMLGGHGDLDLFMRDNIAQDMNGKTLPQMGRYTSGAAKINLATQPLDLPAGLKISPA
AGLEADLLTKVGARPWDRDAHDVRILADIAEGRGKIIDSESEVGGYPVQKPTYRAFVPDD
WDLATMEPRRPDVLDAGAKSRGT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
ctgggtgcgacttcagcggcagttgtgggtttgattgccagccccagcatggcgcagacc
attgccagcgcggctgctgctaaggcattccccggtgctgtgggttgggctgcgaacacc
gtcggcggacggggtggacagatcctgcgcgtcacgactttggccaaggacggccccggt
tccttcaagcaagcgattgagaccaagggccctcgaatcatcgtgtttgaagtgggtggc
gtgattgatctggaagccaccaccttgaagattacggagtcgtttttgaccattgcaggc
caaacggcaccctcgcccggaatcaccttgatccgtggcggcttggacgtggcggcctct
gacgtcatcatgcgccacattcgcgtgcgggccggtgaggctggtaagccgaagatgagc
gggaatgattttgattctttctccaccattggtgcgcgcaacgtgatcgttgatcactgc
agcctgacctggggtacggatgaaaatctgtcagcctctggcccgcgctttactggcaaa
accccggcagaatggcgggcaggcacctcgcgccagatcacctattccaacaatttgatt
gccgaaagcttggctaatgcgacccatgcgaagggggagcattcgaaaggctcactcatc
cacgacaatgccaatgacgtgctgatttatcgcaacgtctatgcccataatgtcgaacgc
aaccccttgtttaaaggcggtgtgcacggtgctattatcaataatctcatttataatccc
ggctaccgcgccattcattacaatctgatggccaatgaatggggcgctcagcccttccag
aatggccggatgaccgtgatcggcaatgccatgcgcggtgggcacaatacaacaccgggc
ctaccgcttgtgatgctgggggggcacggcgacctcgacctcttcatgcgggataatatt
gcccaagacatgaatggcaaaaccctgccacagatgggccgctacacatctggtgctgcg
aaaatcaatctggccacccagccgctcgacctgccagcgggcttgaaaattagccctgct
gctggcctagaggcagacctattgaccaaagttggtgcgcgtccttgggaccgtgacgcc
cacgatgtgcggatcttggcggatatcgccgaagggcgtggcaagatcattgatagcgaa
agcgaagtcggcggctatccggtgcaaaagccaacctatcgtgccttcgtgcccgacgat
tgggacttggcaaccatggagccgcgccgaccagatgtgctggatgctggggctaaatcg
cgcgggacctag
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