Hyphomonadaceae bacterium UKL13-1: AEM38_01690
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Entry
AEM38_01690 CDS
T04338
Name
(GenBank) RNA polymerase sigma 70
KO
K03089
RNA polymerase sigma-32 factor
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbc03021
]
AEM38_01690
Transcription machinery [BR:
hbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AEM38_01690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
KORA
GntR
PgaD
Sbi-IV
HTH_3
NUDE_C
Motif
Other DBs
NCBI-ProteinID:
AMS28483
UniProt:
A0A7U4XW16
LinkDB
All DBs
Position
complement(378380..379264)
Genome browser
AA seq
294 aa
AA seq
DB search
MTRALALNVGPELGLQRYLTEIRKFPMLHKDEEYMLAKRWREHEDTGAAEKLVTSHLRLV
AKMAMGYRGYGLPVAEVISEGNIGLMQAVKKFDPEKGFRLATYAMWWIRASIQEYVLRSW
SLVKMGTTAAQKKLFFNLRRMKSKMQAIEEGDLKPEDVNYIATQLAVTNDEVISMNRRLS
GPDASLNVRVGEDGGGEWQDWLASDDESAETEYAEREEHDERMILLNQALSTLNEREQHI
IRERRLRDDPVTLEDLADQYGVSRERIRQIEVRAFEKMQAAIKKAALESGLIAA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcgcactcgcgcttaatgtagggccagaactgggccttcagcggtatctcact
gagatccgtaaatttccgatgctgcacaaggacgaggaatatatgctcgccaagcgctgg
cgtgagcatgaagataccggtgcagctgaaaagctggtgaccagccatttgcgcctcgtg
gctaagatggcgatgggctatcgcggctatggcctgcctgtggcggaagtgatttcggaa
ggcaatatcggcctgatgcaggcggttaaaaagtttgaccctgaaaagggcttccgcttg
gcgacttatgccatgtggtggatccgcgcttcgatccaagaatatgtgctgcgctcatgg
tccttggtcaaaatgggcaccaccgccgcgcagaaaaagctgttcttcaacctccgccgc
atgaaatccaaaatgcaggcgattgaggaaggcgatctgaaacccgaagacgtcaattat
atcgcgacccaattggctgtgacgaatgacgaagtcatctcgatgaaccgtcgcttgtcg
ggcccagacgcttcgctcaacgtccgcgttggtgaagatggtggcggcgaatggcaggat
tggctggcttccgatgatgagagcgccgagaccgaatatgctgagcgcgaagagcatgac
gagcgcatgatcctgctgaaccaggccttgtcgaccttgaatgagcgcgaacagcacatc
atccgcgagcgtcgcttgcgcgatgatccggtgaccttggaagaccttgccgatcaatat
ggggtcagccgcgagcgcatccgtcagatcgaagtgcgcgcatttgaaaaaatgcaagct
gcgatcaaaaaggcagcacttgagagtggcttaatcgccgcctaa
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