Hyphomonadaceae bacterium UKL13-1: AEM38_05010
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Entry
AEM38_05010 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_05010
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AEM38_05010
TLS (translesion DNA synthesis) factors
Other SOS response factors
AEM38_05010
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_22
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AMS28974
LinkDB
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Position
1112447..1114138
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AA seq
563 aa
AA seq
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MLIALSIRDVVLIETLDLDIEPGFTALTGETGAGKSILLDALGLALGERADRGLVRHGAE
RAQASAIFEIDPHHPAIALLEELDLPEAEDGRIVLRRSISLDGKSRAYVNDGPASVSALR
RLGACLLEIHGQHASVGLMDPSTHRDLLDVFAKAAPFKAQVSEAWRTLDAARSELEEAEL
RARRASTDRDYLAHVLGELQKLAPKAGEEAALDAERRALMGSEKAATALKDATDALADGK
AEQRMAAAARALSRVGKPEGEGADALSKAVDQAAASLERALSELSDAQGWMARAGDALDG
DPGRLDHLEERLFALRAAARKHGVTVEALPDVLQRAEQNLANIDHADEAIQAAKAALAKA
QNAYDQAAAALSERRHTAASALDKAVELELPPLKLEKARFRSRVDSDAARPTKDGIDRVT
FEIAANPGAGFGALSEIASGGELSRLSLALKLVLSTDGGTLALVFDEVDQGIGGATADAV
GRRLARLSQTAQILCVTHSPQVAARARRHWRIEKRVENGITRTGVSTLPDAAREEELARM
LSGAEITAEARAAARALVAASQD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgccttgtcgatccgcgatgtggtcctgatcgaaacgctcgaccttgatatt
gagccgggctttaccgcgctgacgggtgaaacgggggcaggcaaatccattttgttggat
gcgttgggtttggctttgggcgagcgtgcggaccggggtctcgtgcgtcatggcgctgaa
cgcgcgcaagccagcgccatctttgagattgacccgcatcatccagccatcgcgctactc
gaagaattagacctgcccgaagccgaagatggacgcatcgtcctgcgtcgctccatcagc
ctcgacggcaaaagccgcgcttatgtgaatgatggccccgcctcggtcagtgcgctgcgc
aggttgggtgcgtgcctcctcgaaattcatggtcagcatgcctccgttggcctgatggac
ccatccacccatcgcgatttgttggacgtatttgccaaagctgctcccttcaaagcccaa
gttagcgaggcttggcgcacattggatgctgcccggtctgagttggaagaggccgaattg
cgcgcgcgccgtgcctccaccgaccgcgattatctggcccatgtcttgggtgaattacaa
aagctggcacccaaggccggtgaagaagccgcgttggatgcagagcgtcgcgctttgatg
gggtctgaaaaggccgccacggccttaaaagacgcaaccgacgctttggccgatggtaaa
gctgagcaacgcatggccgctgccgcgcgcgcgttatcccgtgtgggcaagcccgagggc
gagggggctgatgcactttccaaggcagtcgatcaagcagccgcctcgctggagcgcgct
ctcagtgaattatccgatgctcaaggctggatggcgcgcgcaggcgatgctttggatgga
gaccccggccgtctcgaccatttggaagaacgtctgtttgctttgcgcgccgctgcccgc
aagcatggcgtgacggtggaggctttgcccgatgtgctgcagcgggctgagcaaaacctc
gccaatattgatcatgccgatgaggccattcaggcggcaaaagcggccctcgccaaagcg
cagaatgcctatgaccaagccgctgctgcgctgtcagaacgccgtcatacggctgcatca
gcgctcgacaaggccgttgagctcgaactgccgccgctgaaactggaaaaagcgcgcttc
cgcagccgtgtcgacagtgatgccgctcgtccaaccaaggacggtattgatcgggtgacg
tttgaaattgcggccaatccaggcgcaggctttggggctttgtcggagattgcttcaggt
ggcgaactttcacgactatcgctcgcgctaaagctcgttctctccaccgatggcggtacc
ttggccttggtgtttgatgaagtcgatcaaggcattggcggggcaactgcagatgccgtc
ggccgccgtttggcgcgcttgtcgcagaccgcgcaaatcctgtgtgtcacccacagcccc
caagttgccgcccgcgcgcgtcgccattggcgcatcgaaaagcgggtagagaatggcatc
acgcgcacaggcgtcagcacgcttcccgatgctgcccgcgaagaagagttggcgcgcatg
ttgtctggagccgaaatcacggctgaagcccgcgcggcggcccgcgccttggttgccgcc
agtcaggactga
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