Hyphomonadaceae bacterium UKL13-1: AEM38_05380
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Entry
AEM38_05380 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Pathway
hbc00550
Peptidoglycan biosynthesis
hbc01100
Metabolic pathways
hbc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AEM38_05380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AEM38_05380
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hbc01011
]
AEM38_05380
Enzymes [BR:
hbc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AEM38_05380
Peptidoglycan biosynthesis and degradation proteins [BR:
hbc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AEM38_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AMS29031
LinkDB
All DBs
Position
1170511..1172427
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AA seq
638 aa
AA seq
DB search
MSQGGGSDLFSRRAMVMSTLGGLYFAVLGLRMAQLQIFENDEFRLEAAENQFNLLVNPAS
RGPVYDRFGVPLAVNRRDFRVSIMREDVDDLPETIGALASILRMSPEKAKESLNEAKISP
RFMPSMVAENLSWEDYSRVSVYAASFPGVRCEMGEARNYPLAESMAHVLGYVAKANDKDV
ATDPQARHPGIRVGKEGIEKAQEKGLKGVHGATKLEVNAHGRVIREVVDPRLNPKSGTPI
VLTIDAEIQQVAYDQFQAKDERPAEAGSAVVMDIRTGELLALVSAPSFDPNKFVDGISRT
DFNEYNNAEMRPLYHKAVRGIYPPGSTYKMVTAVAALEAGITDPEETINCPGFYMLGNHR
FHCHSRRGHGSVNLHTAIKVSCDVYFYEMGRRIGGEKMAEVARGFGFGQRFDLGIPGISS
SHVPDNAWKMKNRGQPWQVYDSLNVAIGQGLIAATPLQMAVMAARIASQGKAVEPRLIRE
GPGAVPITPFKPLPFNYQNMHLVHEGMIAVSNEAGGTGRGDLGIEGVRMAGKTGTAQVRR
ITMAERRTGVRSNASLPWRQRDHALFVCYAPAEDPKYCCALVVDHGGGGGAAAAPRAREI
MKATLLKDPSSRPAFTTKTKTADLAPASNGTPPGDGKA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggtggtggatcagatctattcagccgacgggccatggtaatgtccacgctc
gggggcctctattttgcggtccttggcctgcgcatggcgcagcttcaaatttttgaaaat
gacgaattccggctagaggctgcggagaaccagttcaacctcttggtcaatcccgcatca
cgtgggcccgtctatgatcgctttggcgtgccgctggcagtcaatcgtcgcgacttccgc
gtctcgatcatgcgcgaagacgtcgacgatctgcccgagacgattggggccttggcgtcc
attttgcgcatgtcgcccgagaaggccaaggaatccttaaacgaagccaaaatctcgccc
cgtttcatgccctcaatggtggctgaaaatctgtcatgggaagactattcgcgggtcagc
gtctatgcagcctcattcccgggtgtgcgctgtgagatgggggaagcacgcaattacccg
ctcgccgagagcatggcccatgttttaggctatgttgccaaagccaatgacaaggacgtg
gcgaccgacccgcaagcccgccatcctggtatcagggtcggcaaagaggggattgaaaaa
gcacaagaaaaaggcctcaaaggtgttcatggcgcaaccaagctagaggtcaacgcccat
ggccgggtaattcgcgaagtggtcgatccccgcctcaatccaaagagcgggacgcccatc
gtcctcaccattgatgctgaaattcaacaagtcgcctatgaccagttccaggccaaggac
gaacgccctgctgaggctggttctgcggtggtgatggatatacgtaccggtgagcttctg
gcactggtatcggctccaagctttgaccccaataagttcgtagatggtatcagccgcact
gacttcaacgaatataataatgctgaaatgcgcccattgtaccacaaggccgtgcggggc
atttatccaccgggctccacctataaaatggtgacggccgtggccgcactggaggcaggg
attaccgaccccgaggagacgatcaattgcccgggcttttatatgctgggcaatcatcgc
ttccattgccattcgcggcgcggccatggcagcgtcaacctgcataccgcgatcaaggtc
tcgtgtgacgtctatttctatgagatggggcggcggatcggcggagaaaaaatggccgaa
gttgcgcgaggctttggctttggacagcgtttcgacttgggaattccggggatttcttca
tcacacgttcccgataatgcttggaagatgaaaaatcgtggccagccttggcaagtttat
gactcgctcaatgtcgcgattggacaaggcttgatcgcagccacacccttgcagatggcg
gtcatggcggcgcgcattgcgtctcagggcaaagctgtcgagccacgcttgatccgcgaa
gggccaggtgcggtgcccatcaccccgtttaagcccttgccgtttaattaccaaaacatg
cacctggttcatgagggcatgattgcggtgtccaacgaagccggcggcacgggccgaggc
gaccttggcattgaaggcgtgcgcatggcgggtaagactgggacggcgcaagttcggcgg
atcacgatggctgagcgtcgaaccggcgttcgctccaatgcgtcgctgccttggcgtcag
cgtgaccatgctctgtttgtttgttatgcaccggctgaagatcctaaatattgttgcgct
ttggtggttgatcacggcggcggcggcggtgccgcggcagcaccgcgcgcgcgcgaaatc
atgaaggcgacattgttgaaagacccttcctcgcggccagcctttaccaccaagaccaag
accgcagaccttgccccagcttcaaatggcaccccgccgggggatggcaaagcatga
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