Hyphomonadaceae bacterium UKL13-1: AEM38_06630
Help
Entry
AEM38_06630 CDS
T04338
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbc03032
]
AEM38_06630
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_06630
Enzymes [BR:
hbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AEM38_06630
DNA replication proteins [BR:
hbc03032
]
Prokaryotic type
DNA Topoisomerases
AEM38_06630
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AEM38_06630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMS30877
LinkDB
All DBs
Position
1437236..1440004
Genome browser
AA seq
922 aa
AA seq
DB search
MEPNRPETVIVDVKGITPISIENELKSSYLDYAMSVIVARALPDARDGLKPVHRRILYAM
GEGGYTPDKKHVKSSRIVGDVMGKYHPHGDSAIYDAMVRMAQDFSMSLPLIDGQGNFGSV
DGDPPAAMRYTESKLAKVAMALLDDIDESTVNFQDNYDGSESEPVVLPAKYPNLLVNGAG
GIAVGMATNIPPHNLGEICDATLAILDNPSLSDQDLLDIVPGPDFPTGGEIVGRTGARNG
LLTGRGSVIMRGKTSVENMRGDREAIIISEIPYQVNKSSMIERIAELVREKRVEGISGLR
DESDRRGMRVVIELKRDASAEVVLNQLYRYSQLQTSFGVNMLALVGGRPIQLSMRGLIET
FLTFREEVIARRTRHRLNKARDRGHDLVGLAIAVANIDEVVRLIRESPDPASARLALTSR
DWPAHDLAPIIQLIADPRSVLTEAGTIRMSDDQARAILDLRLQRLTGLGRDELSNEVRSL
AAKIADLLDILRSRARVIEIIRTELTHVRDTYAVPRRTIFIEADLDLEDEDFIEREDMVV
TVSHAGYVKRTLLSTYRTQNRGGRGRSGMETKDEDFVVRLFAASTHAPILFFSSKGIVYR
EKVWRLPQGDPRTKGRSIANILPIEKDEKITTVMPLPEDEDSWGALELMFATRKGNVRRN
SLSDFQRVARGGKIAMKFDDEDDQIVDVAICSDQDDVLLTTRLGQCIRFQATDVRVFKGR
DSTGVRGITLAEGDEVIAMSILRHVDVTAEERATYIKQSRSVQGEEVDPAATEVADEVAE
SEAGPAQLSPERYAELSAREQYVLAVAEEGLGKRASSYEYRVTNRGGKGIVAHDLSRRGG
QLVAAFPVEETDEVMMVTDGGQLIRTRVDQIRRAGRSTQGVMIIRVSEGERVVSVERLAD
MGSDDAEGPAEGTDASPDAPSS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
attgaacccaaccgcccagagacagtcattgtcgacgtaaagggcatcacgccaatctct
atcgagaatgagctcaagtcctcttatttggactatgcgatgagtgtgatcgtggcacgg
gctctcccggacgcgcgcgatggtctaaagcctgtgcaccggcggattttgtatgccatg
ggcgagggcggctatacgcccgacaagaagcatgtgaagtcttcgcgcatcgtcggggac
gtaatgggtaagtatcacccccatggcgacagtgcgatctatgacgcgatggtgcgcatg
gcgcaggacttttccatgagcttgcctttgatcgatgggcaggggaatttcggctcagtc
gacggcgatcctcctgctgcgatgcgttacaccgaaagcaagctggccaaagtagctatg
gcgctactggacgatatcgatgaatccacggtcaatttccaagataattatgatggctct
gaaagcgagccagttgttctgccagccaaatatccaaacctcttggtcaatggcgcaggc
ggtatcgccgttggtatggcgaccaatatcccgccgcataatctgggtgagatttgtgac
gcgactttggcaatcttggataatccaagcctgtcggatcaggatttgctcgacattgtg
ccaggtcctgactttccgacaggtggggaaatcgtcggccgaacgggcgctcgtaatggc
ctcttgaccgggcgcggctctgtcatcatgcgtggtaagacgtcagttgaaaacatgcgc
ggcgaccgcgaagccatcatcatctcggaaattccctatcaggtgaacaagtcctcgatg
atcgagcggatcgctgaattggtacgcgaaaagcgggttgaaggcatttcgggtctccgc
gacgaaagcgaccgacgcggtatgcgggttgtgatcgaacttaagcgcgatgcttcggca
gaagtcgtattgaaccaactttaccgctattcgcagctgcagacctcgtttggcgtcaat
atgttggcgctggtcggtggccgtccaattcaattgtcgatgcgtggcctgattgagacc
ttcctgaccttccgggaagaagtgattgcccgtcgcacccgccatcgtcttaacaaagcg
cgcgaccgcggccatgacttagttggtctggcgatcgcggttgccaacatcgacgaagtg
gtgcgcttgatccgggaatcgcccgatcctgcctctgcccgcttagcgttgaccagccgc
gattggccggcacacgatttggcacccatcattcaattgattgctgacccacgctctgtc
ctgacagaagcgggcacaatccgcatgagtgacgaccaagcgcgcgctattttggacttg
cgtttgcaacgattgaccggcttgggccgcgatgaattgtccaacgaagtccgttctttg
gctgccaagatcgctgatttgctggatattttgcgttcacgagctcgcgtgattgagatt
atccgcaccgaattgactcatgtgcgtgacacctatgccgtcccgcgtcgcaccatcttt
atcgaagccgatctcgatctcgaagatgaagacttcatcgagcgcgaagacatggtcgtc
acggtttcgcacgctggctatgtgaagcggactttgttgtcgacctatcgcacgcaaaac
cggggtggacgcggccgttcgggcatggaaaccaaggacgaagatttcgtggtccgcctg
ttcgcagcctcgacccacgcaccgatcttatttttctcgtccaaagggattgtctatcgc
gagaaggtctggcgtctgccgcagggcgatccacgtaccaagggccgctcgattgccaat
atattgccgatcgagaaagacgagaagattaccaccgtcatgcctctgccagaggatgag
gatagctggggtgctttggaactgatgtttgccacccgcaagggcaatgtgcggcgtaat
tctttgtctgacttccagcgcgtggcgcgtggcggcaagattgccatgaagttcgatgat
gaagatgaccaaatcgtcgatgtcgccatttgctccgatcaagacgacgtcctgctgacc
acgcgcttgggtcagtgcattcgctttcaagcgaccgatgttcgtgtctttaagggccgg
gactcaaccggtgtgcgcggcatcaccttggctgaaggcgatgaagtgatcgcgatgtcg
atcctccgccatgtcgatgtgacggccgaagagcgcgcaacttatattaagcagagccgc
tctgttcagggcgaagaggttgatcccgcggcaacagaggtcgcggatgaagtcgctgaa
agcgaagctgggcctgcccaattgtcgcccgagcgctatgcggaactgtcggcacgtgaa
caatatgtgctggcagtagccgaagaaggcttgggcaagcgagcttcatcttatgaatat
cgcgtcacaaatcgaggcgggaagggcattgtggcccatgatttgtcacgtcgtggcggt
caattggtggcggctttcccagtcgaagagaccgatgaagtcatgatggtgacagacggt
ggtcaattgattcggacgcgtgtagatcaaattcggcgggccggtcgttccactcaaggt
gtgatgatcatccgcgtttcagaaggcgagcgtgtggtctcggtagagcgtctggccgat
atggggtcagatgatgccgaaggtcccgcagaggggacggatgcctcaccagatgcacct
agcagctga
DBGET
integrated database retrieval system
