Hyphomonadaceae bacterium UKL13-1: AEM38_07270
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Entry
AEM38_07270 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Pathway
hbc03030
DNA replication
hbc03430
Mismatch repair
hbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AEM38_07270
03430 Mismatch repair
AEM38_07270
03440 Homologous recombination
AEM38_07270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbc03032
]
AEM38_07270
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_07270
Enzymes [BR:
hbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AEM38_07270
DNA replication proteins [BR:
hbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AEM38_07270
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AEM38_07270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_30
AAA_14
DUF815
AAA_19
TsaE
AAA_18
AAA_24
AAA_assoc_2
ABC_tran
Mg_chelatase
SRP54
nSTAND3
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
AMS29300
UniProt:
A0A7U4QTB5
LinkDB
All DBs
Position
complement(1570327..1572204)
Genome browser
AA seq
625 aa
AA seq
DB search
MDETDLGGEGDLPQSGGFSGYDQADAEPDDLTLSMFGEPAEVPQKTAAGQGAQPYLVLAR
KYRPQRFEDLIGQEAMVRTLTNAFASNRIAHAFMLTGVRGVGKTTTARLIARALNYQTET
IDRPSIQLDPLGSQCEAITRGNHPDVFELDAASRTGVGDMRELLDGVRYGPIAARYKVYI
IDEVHMLSKSAFNALLKTLEEPPPHVKFIFATTEIRSVPVTILSRCQRFDLRRIEPVVLA
DYLEKIASREGTQIARDGVELIARAAEGSARDGLSLLDQAIVQDQGNGVTGTEIRDMLGL
ADRTRTMDLLGAILKGDAKTALQAFREQYDLGADPGLVLRDLMDLTHEISRGDVLGADWH
PAGASDHIQQMKAFAHSTTPAALGRLWQLILRGFEESGRAPDPVQAAEMCLLRACAAQQL
PPPEDLARLLIGQPMASSGSPGPASSQGHSAGPTAALVPQAAEPTPTSAAQPSLSFEGLL
EALEDAREIVLVTELERFVRPVSLEPGRLVIELLPNAPVDLQKRAVEALSALTGDDWLVE
AGSGGQESIAERNKRLEVERVDAAKQAPEVVAALRAFPGARILDVRAAPVPEVALEAVVE
DGDEDGDAEVSNVLSVDFNRRRVGD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacggatcttggcggtgaaggtgatcttccacagtcaggaggattttctggg
tacgaccaagccgatgctgagccggacgatctgaccttgtcgatgtttggtgagcctgca
gaggtgccacaaaagaccgcagctgggcaaggtgcccaaccttatttggtgctggcccgc
aaatatcggccccaacgctttgaagatttgattgggcaagaggcgatggttcgcaccttg
accaatgcgtttgcctctaaccgcatcgcccatgcattcatgctgaccggggtgcgcggg
gtcggcaaaaccacgacagcccgcctgattgcgcgcgcgctcaattatcaaacggagacg
atagatcggccttcgatccagcttgatccgctcggcagccagtgtgaagccatcacgcgg
ggcaatcatcccgatgtctttgaactcgatgctgcctcgcgcaccggggtgggtgatatg
cgcgaattgctcgatggggtgcgctatggcccaatcgcggcgcgctacaaggtctatatc
atcgacgaagtgcacatgctgtcaaagagcgcgttcaacgcgctgttgaagacgttggag
gagccgcctccgcatgtgaaatttatctttgcaaccaccgaaattcgctcggtccccgtc
accattttgtcgcgctgccaacgctttgatttgcgccggattgagcccgtggtgctggcc
gattatttggaaaagatcgcaagtcgtgaaggcacgcagattgcgcgcgacggcgtggaa
ttgattgcacgcgcggccgaaggctctgctcgcgacggcctttcgctcttggatcaagcc
atagtgcaggatcagggcaatggggtcaccggcaccgagatccgcgacatgttgggtctg
gctgaccggacccgcaccatggatttgctgggcgcgatcctcaagggcgatgccaagacg
gcgctacaagctttccgcgaacaatatgatttgggggctgatccgggccttgtgctgcgc
gacttgatggacttaacccacgagatctcgcgcggggatgttctgggtgctgattggcat
cccgcaggcgcaagcgaccatatccagcaaatgaaggcctttgcgcacagtaccacacct
gccgcgcttggccgcctgtggcaattgatcttgcggggctttgaagaatcgggccgggca
cctgatccggtccaagccgctgaaatgtgtttgttgcgcgcgtgcgctgcccagcaattg
ccgccgcctgaagatttagcccgtctcttgattggccagcccatggcgagctctggctcg
ccgggcccagcatcgtcccaaggccacagtgctggcccaacggccgccttggtaccccaa
gccgcggagcctacacctacatcagccgcgcagccgagtttaagctttgaaggcttgctc
gaagcgcttgaagacgcccgtgaaattgtgctcgtgacagaattggaacgctttgtccgc
ccagtgagcctcgagcccggccgcttggtgatcgagcttttgcccaatgcgccggtagac
cttcaaaagcgcgccgtggaagcgctgtctgcccttacaggcgacgactggctggtagaa
gcgggctctggcgggcaagagagtattgccgagcggaacaagcgtttggaggttgagcgg
gtcgatgccgctaaacaggcccccgaagtcgttgcggcactgagagcttttcccggtgcc
cgcattctcgacgtccgcgccgcaccggttccagaagtggccttggaagctgtcgttgag
gacggcgatgaagacggtgacgctgaggtcagcaatgtcctatcggtggactttaaccgc
cgccgcgtcggcgactag
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