Hyphomonadaceae bacterium UKL13-1: AEM38_07345
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Entry
AEM38_07345 CDS
T04338
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Pathway
hbc00260
Glycine, serine and threonine metabolism
hbc00460
Cyanoamino acid metabolism
hbc00630
Glyoxylate and dicarboxylate metabolism
hbc00670
One carbon pool by folate
hbc00680
Methane metabolism
hbc01100
Metabolic pathways
hbc01110
Biosynthesis of secondary metabolites
hbc01120
Microbial metabolism in diverse environments
hbc01200
Carbon metabolism
hbc01230
Biosynthesis of amino acids
hbc01240
Biosynthesis of cofactors
hbc04981
Folate transport and metabolism
Module
hbc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AEM38_07345 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AEM38_07345 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AEM38_07345 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AEM38_07345 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AEM38_07345 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AEM38_07345 (glyA)
Enzymes [BR:
hbc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AEM38_07345 (glyA)
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Gene cluster
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AMS29312
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Position
complement(1585410..1586708)
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AA seq
432 aa
AA seq
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MTSLADSQTFVSKDFFSSSLGAKDSELAAAIQEELHRQQTQIELIASENIVSRAVLEAQG
SVLTNKYAEGYPGRRYYGGCEFVDVAENLALDRAKALFDCSYANVQPHSGAQANQAVFMA
LLKPGDTFLGLDLASGGHLTHGSPANQSGKWFNAISYGVRPDTHLIDYDAVEALAKEHQP
KVIIAGGSAYPRQIDFARFRAIADSVGAYFMVDMAHFAGLVAGKAHPNPLDHAHVVTTTT
HKTLRGPRGGMILSNDEALGKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALTPEFQAYAR
QVVANAQAMATAVKAGGFDLVSGGTDTHVVLVDLRPKDLTGKASEAALERAGFTCNKNGV
PFDPKPPATTSGVRLGSPAGTTRGFGTEEFTWIGNKIVEVLDSLAGTPDGNPEVEKRVRG
EVEAMCARFPIY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacatccctcgctgatagccaaacttttgtaagcaaagattttttctcatcctcgctt
ggggcgaaagattctgaattggcagctgccattcaggaggaacttcatcggcaacagact
cagattgagctgatcgcgtcggagaacatcgtatctcgggcggttcttgaagctcaaggg
tcggtcctgaccaataaatatgccgagggatatcccggtcgccgctattatggtggctgt
gaattcgtcgacgtagctgaaaatttggctctggaccgtgcgaaggcattgtttgactgc
agctatgctaatgttcaaccacattccggtgcgcaagcaaaccaagcggtctttatggcg
cttttgaaaccgggtgacactttcctcggtcttgacttggcaagtggggggcacctcaca
catggctcgcccgccaaccagtctggcaagtggtttaatgcgatttcctacggcgttcgt
cctgatacccatttgattgactatgatgctgtggaggcattggccaaagagcatcagccc
aaggtgattattgcgggtggttcggcctatccgcgtcagatcgactttgcccgcttccgc
gcgattgctgattcagttggtgcctatttcatggtcgatatggcccactttgcaggtctg
gtcgctggtaaagcgcacccaaatccgctggatcacgctcatgtggtcacaaccacgacg
cacaagacgttgcgtgggcctcgcgggggcatgattttgtcgaatgacgaggctttgggc
aaaaaattcaattcggcggttttcccgggcctccaaggcgggcctttgatgcatgtcatc
gcggctaaggccgtggcctttggtgaagctttgacgccagagttccaagcctatgcgcgt
caggttgtcgccaatgcgcaggccatggcaacggcggtaaaggctggcggtttcgatctg
gtttctggcggcacagacacccatgtggtgctggtcgacttgcggcccaaggatctgacc
ggcaaggccagcgaagccgctttggagcgggctggctttacctgtaacaagaacggcgtg
ccatttgatccaaagccacctgcaaccacgtctggcgttcgtttgggctctccagctggc
acgacacggggttttggcaccgaggaatttacttggattggcaacaagattgtggaagtc
ttggactcgcttgccgggacccccgatggcaatccagaagtggaaaagcgcgtgcgtggt
gaagttgaagccatgtgtgcccgtttcccaatctattag
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