Hyphomonadaceae bacterium UKL13-1: AEM38_07475
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Entry
AEM38_07475 CDS
T04338
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_07475
Enzymes [BR:
hbc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AEM38_07475
DNA repair and recombination proteins [BR:
hbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AEM38_07475
Prokaryotic type
AEM38_07475
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMS29332
UniProt:
A0A7U4QTC3
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All DBs
Position
1612164..1613657
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AA seq
497 aa
AA seq
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MQLAQSGPNPPVRPSLVWFREDLRIDDHPALAAAAQAGPVCAVYILEEGADLGRPLGGAL
KWWLHHSLTSLLASLAEHGIELILLRGDPRQLIPALAKSLDAESVHWNRRYYAWSRPVDA
AIKADLTGLGVQVGTHKAYVLTEPWEIKTGSGGNFKVFTPFFRAAQSSCDAWAEHAAPAP
KLTGCTSSQINSAALDDWDLLPIAPDWSGGLSQTWRPGEVGAHKRLKHFIDKALLGYGDG
RNIPSKPATSFLSPHLHFGEISIRRVWNAARTAMRANPALQADGQVFLSELGWREFSTQL
IYHYEDFPQESWKEAFRSFPWKNDSSALRAWQSGQTGYPIVDAGMRQLWKTGWMHNRVRM
IVASFLVKHLLQDWRAGEAWFWDTLVDADVANNAAGWQWVAGCGADAAPYFRIFNPMSQG
EKFDPDGHYVRTWVPELAKLPNKYLHRPFEAPTEILRLSGVHLGRTYPLPIVNHEKGRKQ
ALDALASLKQTHSGDLV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgcccaatctggccctaacccgcctgtgcgcccgtcccttgtctggtttcgc
gaagacttgcggatagatgatcacccggctttagcggcagctgctcaagctggcccagtc
tgcgctgtctatattctcgaagagggtgcggatttaggtcggcccttaggtggcgcgttg
aagtggtggctgcatcacagcctcacaagcctactggcaagccttgctgagcacggcatc
gaactgatcctgttacggggcgatccgcgccaattgatacccgccctcgctaaatccttg
gatgccgagtccgtccattggaaccggcgctattatgcttggtcgcggcctgtcgatgcc
gccatcaaagccgacttgacaggcttaggcgtccaagtcggcacgcataaagcctatgtt
ctgaccgaaccttgggagatcaagaccggttctggcggcaatttcaaagtcttcacgccg
ttttttagagcagcccaatccagttgtgacgcgtgggccgagcatgcggcccctgcccca
aagctcacgggttgcacatcctcccagataaattcagcagccttggacgactgggacctg
ttgccgatagcacccgattggtctggtggcctatctcagacttggcggcctggagaggtt
ggcgcgcacaagcggctcaagcactttatcgacaaggcgctactcggctatggcgatgga
cggaatatcccaagtaaaccagcgacttcgtttctctcgccacatttgcactttggtgaa
atctccatccgtcgcgtttggaatgcagcccgtacagccatgcgcgccaatccggcccta
caagcagatggccaagtctttttgtctgaacttggatggcgagagttttcgacccaattg
atttatcattatgaagacttcccgcaggaaagctggaaagaggccttccgcagcttccca
tggaaaaatgattcatccgctctgcgggcttggcaaagcggacaaacaggttaccccatt
gtggacgcaggtatgcgtcaattatggaagacaggttggatgcataatcgggttcgcatg
attgtcgcctccttcttggtgaagcatttgttgcaagattggcgcgcgggtgaagcttgg
ttctgggatacgttggtggatgccgatgtcgccaataatgcggctggttggcaatgggtt
gcgggctgtggcgcagatgctgcgccctatttccgtatcttcaacccaatgtcgcaaggc
gagaagtttgacccagatggccactatgttcgcacatgggtgccagaactggcaaaacta
cccaacaaatatctacaccgcccgtttgaagcgccaactgaaatcttgcggctttctggc
gttcatctcgggcgcacctatccgcttcccatcgtcaatcatgaaaaaggccgcaagcag
gcactcgatgccctcgccagcctcaagcagacccattctggagacctagtatga
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