Hyphomonadaceae bacterium UKL13-1: AEM38_09105
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Entry
AEM38_09105 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hbc03009
]
AEM38_09105
Enzymes [BR:
hbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
AEM38_09105
Ribosome biogenesis [BR:
hbc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AEM38_09105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AMS29572
LinkDB
All DBs
Position
1958809..1959564
Genome browser
AA seq
251 aa
AA seq
DB search
MAHRPTRHFSAKGPAPLGKEERDYIRDMVVYEDDALIAFNKPSGLAVQGGSGVTRDVDRL
LAAFTTRKGRKPKLVHRLDRETSGLLIVAKTSPAAAHLSAQFAGRQLEKRYLALVGGKLA
AVEGQIDLPLVKIKSGGIDLMRPANAGEAEAQAALTAYRVLGSGAAASLVEVAPKTGRMH
QIRVHFAAIAHALAGDTKYGGLLLLAGKPCPRLMLHAAALDFTHPTTGEPMHLKIPPPEE
FSAFVKLVLPD
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcccatcgtcccacccgtcacttttcagcaaaaggccctgccccactcggcaaagaa
gagcgggactatatccgcgatatggtggtttatgaggacgatgcgctgatcgccttcaat
aagccctccggcttagccgttcagggtggttcaggggtgacgcgcgacgtggatcggctg
ttggctgctttcaccacccgcaaagggcgcaaaccaaaactcgtccaccgtttagaccgt
gagacttccggcctgttgatcgttgccaaaactagtcctgctgccgcgcatctgtcggcc
caatttgccggacgacagttggagaagcgctatctggcgctggttggtggcaaactggcg
gcagtggaaggtcaaatcgacctgcctctggtcaaaatcaagtccggcggtatcgacctg
atgcgtcctgccaatgccggagaagcagaggcccaagccgccttgaccgcctatcgcgtc
ttggggtcaggcgctgcagcgtccttagtggaagtagccccgaaaacaggccggatgcat
caaatccgggtccatttcgccgccattgctcatgctctggcgggcgatacgaaatatggc
gggctactcctgctcgcaggcaagccctgcccgcgcctgatgttgcacgctgcggcgctg
gacttcacccatccgacgacaggtgagcccatgcacctaaaaatacccccgccggaagaa
ttttcggcgtttgtgaagttggtgttgccagactga
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