Hyphomonadaceae bacterium UKL13-1: AEM38_12725
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Entry
AEM38_12725 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbc03021
]
AEM38_12725
Transcription machinery [BR:
hbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AEM38_12725
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
UPF0122
NirdL-like_HTH
Sigma70_ECF
HTH_11
HTH_24
HTH_23
HTH_AsnC-type
Sigma70_r4
GerE
Perilipin_2
Terminase_5
PH0730-like_N
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AMS31056
LinkDB
All DBs
Position
2719919..2720365
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AA seq
148 aa
AA seq
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MIDRIIAGMERNPACQDEVRQEVALALWRAAPSWRRDCSLRTFVARVTHNVCVSHVRRVI
RAPKHDQISDTVQDEAEAVDDAVVRADLGRRLQVAVSELPRGMREVATLYLDDFSGREIA
ETLGISEGAVFTRITRLREMLRKVMDTK
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccggatcattgctggaatggaaagaaatccggcgtgccaggatgaggtgcgg
caggaagtggctctcgcgctctggcgcgcagcgccatcctggcgtcgggattgctccttg
cggacattcgtggcgcgggtgacgcacaatgtctgtgttagccatgttcggcgggtcatc
cgcgcacccaagcacgaccagatctcagacacggttcaggatgaagccgaagcggttgac
gacgcggtcgttcgcgcagatctaggccgacggttgcaggtggcggtatccgaattgcca
cgtggcatgcgggaggtggcaaccctctatctcgatgatttctcgggccgtgaaatagcg
gagacccttggcatcagtgaaggggcagtcttcacgcgtatcacgcggctgcgcgagatg
ctgcgcaaggtaatggatacaaaatga
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integrated database retrieval system