KEGG   Hyphomonadaceae bacterium UKL13-1: AEM38_12725
Entry
AEM38_12725       CDS       T04338                                 
Name
(GenBank) hypothetical protein
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
hbc  Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:hbc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hbc03021]
    AEM38_12725
Transcription machinery [BR:hbc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     AEM38_12725
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 UPF0122 NirdL-like_HTH Sigma70_ECF HTH_11 HTH_24 HTH_23 HTH_AsnC-type Sigma70_r4 GerE Perilipin_2 Terminase_5 PH0730-like_N HTH_10
Other DBs
NCBI-ProteinID: AMS31056
LinkDB
Position
2719919..2720365
AA seq 148 aa
MIDRIIAGMERNPACQDEVRQEVALALWRAAPSWRRDCSLRTFVARVTHNVCVSHVRRVI
RAPKHDQISDTVQDEAEAVDDAVVRADLGRRLQVAVSELPRGMREVATLYLDDFSGREIA
ETLGISEGAVFTRITRLREMLRKVMDTK
NT seq 447 nt   +upstreamnt  +downstreamnt
atgatcgaccggatcattgctggaatggaaagaaatccggcgtgccaggatgaggtgcgg
caggaagtggctctcgcgctctggcgcgcagcgccatcctggcgtcgggattgctccttg
cggacattcgtggcgcgggtgacgcacaatgtctgtgttagccatgttcggcgggtcatc
cgcgcacccaagcacgaccagatctcagacacggttcaggatgaagccgaagcggttgac
gacgcggtcgttcgcgcagatctaggccgacggttgcaggtggcggtatccgaattgcca
cgtggcatgcgggaggtggcaaccctctatctcgatgatttctcgggccgtgaaatagcg
gagacccttggcatcagtgaaggggcagtcttcacgcgtatcacgcggctgcgcgagatg
ctgcgcaaggtaatggatacaaaatga

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