Hyphomonadaceae bacterium UKL13-1: AEM38_14925
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Entry
AEM38_14925 CDS
T04338
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_14925
Enzymes [BR:
hbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AEM38_14925
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AEM38_14925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AMS30439
UniProt:
A0A7U4QVD8
LinkDB
All DBs
Position
3226632..3229685
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AA seq
1017 aa
AA seq
DB search
MRDLFETPTPRAFTIPPAVSFLDVLARTLVEALSRDETPFALSDAIIVLPTRRAARGLAQ
AFLNCSPQTATLLPRIRTLGDLNPEDAGLGEFGDDLDQAPAIDPLARRLILARLIQARGV
QSDWSSDPVSALLAADALADLLDSAAMMASGTESFDWSKLSTLVSEHELAKHWEQSTTFL
TIVTEAWPAYLASVNKVDPGVQQRRNIEAMVDKWRAVPPQQTIVLAGSTGSMPVTRKLMQ
LIARLPQGMVVLPGLDTHISGEAWIAARHDDQHPQRALSEAIEAIGIERHDVRVLPGVVE
PIALAQRRLVINEALTPQASTADWPSRIEDLGPANIIAGLEGLTLIEAASEEEEASLIAH
ELRETLETADQTVALVTPSAEIARRVAAKMQRWDIQVDVSSGRPISDTSIGSFLRHVMQW
SQDPSDPVLLCALLGHPLTSIGLAREHVAACAAAIETGILRGPRKARTLPQLIEQLEALK
PAYWHAMQVNGQPVEKQNGIVLLQKLDQLLTQTGQLSGSLPDCAQTIATLAEALAATEAQ
KGAEIVWRGEAGESAARFFASLMEHGLLFPPIQPQAIGRTLDHLMADLVVRPRGTHPRIS
ILGPLEARLLQFNKVVLAGLDEGVWPQPAAPDPFLSRPMRQHLGLPSPDTRIGLSAHDFA
QFASAPRVLLTRSARRKDAPAVPSRWLWRLKTLAAGALGEKDAANVLADGSDWQSRLRAH
APNRVFEPTKAIPAPKPPVHARPRSFHATQIETWIRDPYRTYVERVLNLRALDPLGGPIS
AGVRGNAIHKGFEVIADWYDRAPHDAVKALHQAFETALREAGYDETSIAVELARLEPTID
FAVEVEMPRLLAGWRPIVEKKGSLTLDTPEGDLTIMARADRVDIGPDGTEILDFKSGKPP
SSTEVYAMFGIQLPVIALIAANGGFDGLAASMPSDLRHIHVGGRNPKVDPAVHSKTSVPE
LVERAENTLRKLSALYHNPDRAYLPKPRVSLLKKVTYDDPVDRLSRRAEWANAEDSE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacttatttgagacgccgacaccacgggctttcaccatccccccggccgtctct
tttctggacgtgcttgcgcgcactttggtggaagccctttcccgggatgagacgccattt
gcgctctccgatgcgatcattgtcctgcccacgagacgggcggcgcgcggacttgcgcag
gcattcttaaactgcagccctcagacggcgacgctgctgccgcgtatccgcaccttggga
gaccttaatcctgaagatgcaggtcttggtgagtttggcgacgatttggaccaagcaccc
gccatcgacccgctggcgcgtcgcctcatcttagcccgtctgatccaagcccgtggtgtc
cagtcggattggtcatccgaccccgtctctgccctcctcgccgccgatgccttggccgac
ctattggattccgccgccatgatggccagtgggacagaaagctttgactggtccaaacta
tcgactttggtcagtgaacatgagttggccaagcattgggaacaatccaccacgtttctg
acgatcgtcaccgaagcttggccggcctatctcgccagcgtgaacaaggtcgatcccggt
gtgcaacagcggcgcaacatcgaagccatggtggacaaatggcgcgcagtcccgccacag
caaaccattgtgctggcgggttcaaccggctctatgccggtcacgcgcaaactgatgcag
ctgatcgcccgcctgccgcaaggcatggtcgttctgcccggtctcgacacccatatttcc
ggcgaggcttggatagcagcgcgtcatgacgaccaacatcctcagcgggcgctatctgaa
gccattgaggctatcgggatcgaacgccacgatgttcgagtgctgccgggtgtcgtggaa
cccattgcactcgcccaacgccgcctcgtcatcaatgaagccctgacgccgcaagcctca
accgcggactggccctcgcggatcgaggaccttgggccggctaatattatcgctggcctt
gaaggcctcacgctgatcgaagcggcgagcgaagaggaagaggccagcttgattgcacac
gaattacgcgaaacgctggaaactgccgatcaaaccgttgccctcgtcaccccaagcgcc
gagatcgcgcgccgcgttgcggccaagatgcagcgttgggatattcaagttgacgtgtca
tccggtcggccaatcagcgataccagcatcggcagctttttgcgtcatgtcatgcaatgg
agccaggaccccagcgacccagttttgctgtgcgcactccttggccatcctttgacgtca
attggccttgcccgagagcacgtcgccgcttgtgcagccgctattgagacgggcattctc
cgtggaccccgcaaagccagaactctgccccaattaattgagcaacttgaggccctaaaa
cccgcctattggcatgcgatgcaggtcaatggccaaccggttgaaaagcagaacggtatc
gtcttgcttcaaaagctcgaccagctcctaacccaaaccgggcaactcagcggctccctg
cccgactgcgcccagaccatcgccactttggccgaggcgctggctgcaaccgaagcgcaa
aaaggtgccgagattgtctggcggggagaggcgggtgagtctgcggcgcgcttctttgcc
tccctcatggagcatggcctgctttttccaccgatccagccccaagcgattggtcggacg
ttggatcatttgatggcagacttagtcgtccgcccgcgtggaacccacccgcgcatctcc
attctaggcccgttggaagcccggctcttgcagttcaataaagtggttttggccgggctt
gatgagggtgtctggccacagcctgctgcacccgaccccttcttgtcgcgccccatgcgc
cagcatttggggctgccctcgcccgacacccgcattgggctttccgcgcatgacttcgcc
caatttgcctccgcacctcgtgtcttgctaacacgctctgcccgccgaaaggacgcgcca
gcggtgccatcgcgttggctttggcgactgaagacgcttgctgcaggggctttgggcgaa
aaagatgccgctaacgttctggcggatgggtcagactggcagtcgcgattgcgggcgcac
gcgcctaaccgcgtttttgagcccactaaggccattcccgctccaaaaccacccgtgcat
gcccgaccacgcagcttccatgcgacacagattgaaacttggatccgcgatccctatcgc
acctatgtcgaaagagtcctcaatttgcgcgcacttgatcccttaggtgggccgatcagc
gcaggtgtgcgcggtaacgcgatccataaaggctttgaggtcattgcagattggtatgat
cgagcacctcacgacgccgtcaaagcccttcatcaggcatttgaaaccgctttgcgtgaa
gccggatacgacgagaccagtattgccgttgaactggcacgcttagagcccaccattgat
tttgcggtcgaagtggaaatgccgcgcctcttggctggctggcggcccattgtcgagaaa
aaaggaagcctgacactcgatacgcccgaaggcgacctcaccataatggcacgggcagac
cgggtagatatcgggccagacggcaccgaaatccttgacttcaaaagtggcaaaccgccc
tcgagcactgaagtgtacgccatgtttggcattcaattacccgtcatcgcgctgattgct
gccaatggcggctttgacggtctcgccgccagcatgcctagtgacttgcgtcatatccat
gtgggtggtcgcaacccaaaggttgaccctgcggtccacagtaaaaccagtgtaccagag
cttgtcgaacgggcagaaaacacgctgcgaaagctttccgcgctctatcataaccctgac
cgcgcctatttgcccaaaccacgtgtcagcttgctcaaaaaggtgacctatgacgatccc
gtcgaccgactgtcccgacgggccgagtgggccaatgcggaggacagcgaatga
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