Hyphomonadaceae bacterium UKL13-1: AEM38_15105
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Entry
AEM38_15105 CDS
T04338
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hbc
Hyphomonadaceae bacterium UKL13-1
Pathway
hbc03030
DNA replication
hbc03430
Mismatch repair
hbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AEM38_15105
03430 Mismatch repair
AEM38_15105
03440 Homologous recombination
AEM38_15105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbc03032
]
AEM38_15105
03400 DNA repair and recombination proteins [BR:
hbc03400
]
AEM38_15105
Enzymes [BR:
hbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AEM38_15105
DNA replication proteins [BR:
hbc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AEM38_15105
DNA repair and recombination proteins [BR:
hbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AEM38_15105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMS30469
LinkDB
All DBs
Position
complement(3267684..3268430)
Genome browser
AA seq
248 aa
AA seq
DB search
MREIVFDTETTGTDPERGDRIVEIGCVELIDLVPTGVTFHRYINPERDVPAEVVRVHGLT
GEFLSDKPVFGASEVVEELLAFIGDAPLVAHNAEFDRRFLNAELGRLGLSLIPKERCVDT
LLIARKKYPGAPASLDALCRRLNIDLTARDKHGALLDSQLLAAVYLELKGGRERRLDFLD
PDAAAQTQNQTSQGILEAKSNQPRRERPQALGLLSTLEEIEAHRAFVATLGKEPAWNRFL
TESGQGTA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaattgtttttgataccgaaacaacgggaaccgaccccgaaaggggcgaccga
attgtcgaaatcgggtgcgtggaactgatcgaccttgttcctaccggcgtgacttttcac
cgatatatcaatccagagcgcgatgttccggcagaagttgtgcgggttcacggcctgacg
ggtgaattcttgtccgataagccagtgtttggtgcgtctgaagtggttgaagagctattg
gcctttatcggcgatgcgccgcttgtcgcccataatgcagagtttgaccgccgcttcttg
aatgcagagcttggccggctcgggttgtcgctcattccaaaagagcgctgcgttgatact
ttattgatcgctcgcaagaaatatcccggcgcgcctgcctcgttggacgctttatgtcgc
cggctgaacatagatttgacggcgcgcgataagcacggggcgctgttagactcgcaattg
ctggcggcagtttatctcgaacttaagggaggccgggaaaggcgtctcgattttctcgat
cctgacgcggcggctcaaacccagaaccaaacgtcgcaaggcattttggaagccaaatca
aaccagccaaggcgagagcgcccccaagcgttagggcttttgtcgacgctggaagaaata
gaggcgcatcgcgccttcgtcgccacactgggtaaggaacctgcttggaacagattcctt
accgaaagtggtcaagggacagcctag
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