Halomonas beimenensis: BEI_0342
Help
Entry
BEI_0342 CDS
T05125
Name
(GenBank) DinG family ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BEI_0342
09124 Replication and repair
03420 Nucleotide excision repair
BEI_0342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbe03021
]
BEI_0342
03036 Chromosome and associated proteins [BR:
hbe03036
]
BEI_0342
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_0342
Enzymes [BR:
hbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BEI_0342
Transcription machinery [BR:
hbe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BEI_0342
Chromosome and associated proteins [BR:
hbe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BEI_0342
DNA repair and recombination proteins [BR:
hbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BEI_0342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
ATJ81329
UniProt:
A0A291P374
LinkDB
All DBs
Position
357270..359546
Genome browser
AA seq
758 aa
AA seq
DB search
MSETAGYRIAVRALCEFTARRGDLDHRFTPAPSAREGIEGHARVRERRGEGYEAELPLSG
EFRSLTVAGRADGYDPAANRLEEIKTHRGSLERMTANQRALHWAQAEVYGALLCAERGLE
SLTLALVYLDVATGRETRLTREARADDLQAGFEAHCRAFLAWAEQEAAHRAARDAALSRL
AFPHDDFRPGQRALAEDAYRAAATGRCLLAQAPTGIGKTLGTLFPLLAAMPRQALDRLAF
LTMKTPGRRLALDALADLGAADGEPRLPLRVLELVARDKACEHPDRACHGEACPLAEGFF
DRLPAARRDAVARGWWDRGALREVALDHGVCPYYLGQELARWADVLVGDVNHYFDDGALI
HGLVQVDGTRLGLLVDEAHNLVDRARGMYSAELDQRRLNRLRRSAPPALSRPLGRLARRW
QALLREVDECDWQALDELPRGLVGALQQAVAAITDYLGEHPSGADPALQEFLFEALAFAR
LAERFGGHSLCELRRPGRGRARLAIRNLIPADFLAPRFEAARCAVLFSATLSPAAYHRDL
LGLPDDAVSRRVAAPFAAEQLEVRCRTDVSTRLVDREASLAPIVAELAGQYRRRPGHYLA
FFSSFAYLEAALARLREACPAIPVRAQHRGMDEAEREAFLAGFVPGEAGIAFAVLGGAFA
EGIDLPGERLIGAFVAILGLPPFDPFHEVLKARLEARFGRGHDYAYRIPGMIKVVQAAGR
VIRGPEDRGVVVLMDDRFARAENRALLPDWWRLGSGSA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagacggcgggctatcggatcgccgtgcgggcgctgtgcgagttcaccgcccgg
cgcggcgacctggatcaccgcttcacccccgcgcccagcgcccgggaggggatcgagggc
catgcccgggtacgcgagcggcgaggcgagggctacgaggccgaactgccgctgtccggg
gagttccggagcctgacggtcgccggccgcgccgacggttatgatccggccgccaaccgc
ctggaggagatcaagacccaccgcggcagcctggagcgcatgacggccaaccagcgcgcc
ctgcactgggcccaggcggaggtctacggcgccctgctgtgcgccgaacgcgggctcgag
tccctgaccctggcgctggtctacctggatgtcgccaccggtcgcgagacgcggctgacc
cgggaagccagggccgacgacctccaggccggcttcgaggcccattgccgggccttcctg
gcctgggccgagcaggaggcggcgcatcgggcggcccgggacgcggccctgtcgcggctc
gccttcccccacgacgacttccgtcccggccagcgcgccctggcggaggacgcctaccgg
gccgcggcgaccggccgctgcctgctggcgcaggcgcccaccggcatcggcaagaccctg
gggaccctcttcccgctgctcgccgccatgccccgccaggccctcgaccggctggccttc
ctgaccatgaagaccccggggcggcgcctggccctggacgccctggcggacctgggcgcc
gccgacggcgagcctcgcctgccgctgcgggtgctggagctggtggcccgggacaaggcc
tgcgagcatcccgaccgcgcctgccacggcgaggcctgcccgctggcggagggcttcttc
gatcgcctgccggcggcgcgccgggacgccgtggctcgcggttggtgggatcgcggcgcg
ctgcgcgaggtggcgctcgatcacggcgtctgtccctactacctgggccaggagctggcc
cgctgggccgacgtgctggtcggcgacgtcaaccattacttcgacgatggcgccctgatc
catggcctggtgcaggtcgacggcacccggctcggcctgctggtggacgaggcccacaac
ctggtcgaccgggcccggggcatgtacagcgccgagctggaccagcgccggctgaaccgg
ttgcgcaggtcggcgcccccggccctgtcgaggccgctgggacgcctggcccggcgctgg
caggcgctgctgcgcgaggtcgacgagtgtgactggcaggccctggacgagctgccccgg
gggctggtcggcgccctccagcaggcggtggcggcgatcaccgactacctgggcgagcat
ccgagcggggccgatccggccctgcaggagttcctcttcgaggccctggcctttgcccgg
ctggcggaacgcttcggcgggcactccctgtgcgagctgcgccgtcccgggcgagggcgg
gcccggctggcgatccgcaacctgatcccggcggacttcctggcgccgcgcttcgaggcc
gcccggtgcgcggtgctgttctcggcgaccctcagcccggcggcctatcaccgtgacctg
ctggggctgcccgacgacgccgtgagccgtcgggtggccgcccccttcgccgccgagcag
ctcgaggtgcgatgccgcaccgacgtctccacccggctggtcgaccgcgaggcctcgctt
gcgcccatcgtcgccgagctggccggccagtaccggcgccgcccggggcactacctggcc
ttcttcagcagcttcgcctacctggaggcggcgcttgcgcgcctgcgcgaggcctgcccg
gcgatcccggtgcgcgcccagcatcgcggcatggacgaggccgagcgcgaggccttcctg
gccggcttcgtccccggggaggcgggcatcgccttcgccgtgctcggcggggccttcgcc
gagggcatcgacctccccggcgagcggttgatcggggccttcgtcgccatcctgggcctg
ccgcccttcgatcccttccacgaggtgctcaaggcgcggctcgaggcgcgcttcggccgc
ggccacgactacgcctaccggatccccggcatgatcaaggtggtgcaggccgccgggcga
gtcatccgcggccccgaggaccgcggcgtggtggtgctgatggatgaccgcttcgcccgg
gccgagaaccgggcgctgctgcccgactggtggcggctcggttcaggatcggcctga
DBGET
integrated database retrieval system
