Halomonas beimenensis: BEI_0552
Help
Entry
BEI_0552 CDS
T05125
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BEI_0552 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_0552 (recB)
Enzymes [BR:
hbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BEI_0552 (recB)
DNA repair and recombination proteins [BR:
hbe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BEI_0552 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATJ81539
UniProt:
A0A291P3U1
LinkDB
All DBs
Position
complement(570714..574655)
Genome browser
AA seq
1313 aa
AA seq
DB search
MTSAETVQTTEPPRLDPVALPLTGSRLIEASAGTGKTFTIALLYLRLVLGPRDAEDAASF
PRPLTPPEILVVTFTNAATQELRDRIRARLVEAADAFQNDISTVEIGGVNPEGASGAGLG
GGPIPRKESVAPKDGFTAPPERPAPAKAPSQNETADLFAEPPVDNSTPGDNAGDAPPGGD
PLIALRDSYPRESWPTCARRLRLAAEWMDEAAVSTIHSWCHRMLREHAFDSGSLFALEMA
LDQSEMDLEIARDYWRSFYYDLAPEALEIVARYWTTPDALNDTAARLRTHAAALPAAPPP
AEALVAYREQRAAALAELKAPWPAWLDELEALLEAAAKRKAFNGQKLNAKHRANWLGALR
DWASDPELATPALTDAAWKRLTPEGLAEIWKEDPVPNLPALEALAELPERFAELPDPFAD
LLAHAVHWMAARRETVQRRRAELGPDDLLHRLDAAFAGEAGETLAARIREQFPVALVDEF
QDTDPVQYRLFDRVYRLAEDRDDSAVLLIGDPKQAIYAFRGADIHTYLQARRDTAGRHVT
LGTNFRSAAPMVEAVNRVFAHAERSETGAFLFRRGDDNAVPFSPVEAKGRKDALVRLGTA
QPALTLWHLAAETPLSKSAYLAELAGRCAAEMAALLREGQAGQAGFEQDGEFRPLAPSDL
AVLVNNAGEARAIRSALLARGIRSVYLSDKEGVFETEAAAELEVWLAACAAPDDERALRA
ALATPSLGLGLAELDALNGGPQQDELAWEARVMQFRDYHRQWQRRGVLPMLHRLLADFAV
PGRLLTVPEGERRLTDLLHLGELLQEASAEIDGEHALLRHLAESRARPHEQSDAHRLRLE
SDADLVQVVTIHKSKGLEYPLVFLPFIAAFRPVKAGDLPLRWHDDDGNLRLSLDADEAIL
ARADRERLGEDLRKLYVALTRARHATWIGLAPLEAMERSAVGHLLSGGEPLPPEALRPAL
EALADKKADDSGRVRVTEAPAADPAPVHLATETEALGEARAPTRTIREHWWIASYSALRA
GATPDEAGPETAAEAEPAPEPTTADEATAMEVIDEPFDAGAAAVSEGSLHRFPRGPSAGT
FLHGLLEWAGEEGFAKVAEDAALREDTLARRANRRGWEGQIEALSQWLPELLTTPLPVPD
EAAPLRLDALAGYRVELEFWFAAHKVDTRRLDALVSAYTLGGRPRPALEPDTLNGMLKGF
IDLVVEHWGRFYVLDWKSNHLGADDAAYTEAAMAEAVLEKRYDVQYCLYLLALHRLLQAR
LPDYDPERHLGGALYVFLRGTRAPSRGVHAERPPSELILALDALFRAAEEDAA
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagcagagaccgtgcagacgaccgagcccccgcgcctcgacccggtggccctg
ccgctcaccggcagccggctgatcgaggccagcgccggcaccggcaagaccttcaccatc
gccctgctctacctgcggttggtgctcggtccccgcgacgccgaggacgcggccagcttc
ccacggccgctgaccccgccggagatcctggtggtgaccttcaccaacgccgccacccag
gagctgcgcgaccgcatccgcgcccggctggtggaagcggcggacgcttttcagaacgac
atcagcacggttgagataggcggcgtaaaccccgaaggggcgtctggagcaggtcttgga
ggaggtccgattccaaggaaggaatcggtagcgcccaaggatgggtttacagcgcctccg
gaaagacctgctccagcaaaagccccgtcccagaatgaaaccgccgacctcttcgccgaa
ccaccggtggataactcaacccctggggataatgcgggcgacgctccgccgggcggcgat
ccgctgatcgccctgcgcgacagctaccctcgggagagctggccgacctgcgcccggcgc
ctgcgcctggccgccgagtggatggacgaggccgcggtctccaccatccactcctggtgc
caccgcatgctgcgcgagcacgccttcgacagcggcagcctgttcgccctggagatggcg
ctggaccagtcggagatggacctggagatcgcccgggactactggcgcagcttctactac
gatctcgcccccgaggcgctggagatcgtcgcccgctactggaccaccccggacgccctc
aacgacaccgccgcccggctgcgcacccatgccgccgccctgcccgcggccccaccgccg
gccgaggccctggtcgcctaccgcgagcagcgcgccgcggccctggccgaactcaaggcg
ccctggccggcctggctcgacgagctggaagcgctgctcgaggccgccgccaagcgcaag
gcgttcaacggccagaagctcaacgccaagcaccgcgccaactggctcggcgccctgcgc
gactgggcgagcgacccggaactggccaccccggcgctgaccgacgccgcctggaagcgc
ctgacgcccgagggcctcgccgagatctggaaggaagacccggtgcccaacctgccggcg
ctggaggccctggccgagctgccggagcggttcgccgagctgcccgatcccttcgccgac
ctgctcgcccatgccgtgcactggatggccgcgcgccgcgagacggtgcaacgccgccgc
gccgagctcggccccgacgacctgctgcaccgcctggacgccgccttcgcgggggaagcc
ggcgagacgctggccgcgcgcatccgcgagcagttcccggtggccctggtcgacgagttc
caggacaccgacccggtgcagtaccggctcttcgaccgggtctaccggctcgccgaggac
cgcgacgacagcgccgtgctgctgatcggcgaccccaagcaggccatctatgccttccgc
ggcgccgatatccacacctacctccaggcccggcgcgacaccgccggccgccacgtcacg
ctcggcaccaacttccgctccgccgcgcccatggtcgaggccgtgaaccgggtgttcgcc
cacgccgagcgcagcgagaccggcgccttcctgttccgccgcggggacgataatgccgtt
cccttcagtcctgtcgaggcgaagggcaggaaagacgccctggtgcgcctgggcaccgcc
cagccggcgctgaccctctggcacctcgccgccgagacgccgctgtcgaagtccgcctac
ctcgccgagctggccgggcgctgcgccgccgagatggccgcgctgctgcgcgagggccag
gccgggcaggccggcttcgagcaagacggagaattccgccccctggcgccctcggacctg
gccgtgctggtcaacaacgccggcgaggcccgcgccatccgcagcgccctgctcgcccgc
ggcatccgcagcgtctacctctccgacaaggagggcgtgttcgagaccgaggccgccgcc
gagctggaggtgtggctggccgcctgcgccgccccggacgacgagcgtgccctgcgcgcg
gcgctcgccacccccagcctgggcctgggcctggccgagctcgacgccctgaacggcggc
ccccagcaggacgagctggcctgggaggcgcgggtgatgcagttccgcgattaccaccgc
cagtggcagcgccgcggcgtgctgcccatgctgcaccggctgctggccgacttcgccgtg
cccggccggctgctcaccgtgccggaaggagaacggcgactgacggatctgctgcacctg
ggcgagctgctccaggaggccagcgccgagatcgacggcgagcatgccctgctgcgccat
ctggccgagtcccgggcccggccccacgagcagtccgacgcccaccggctgcgcctggag
agcgacgccgacctggtgcaggtggtgaccatccacaagtccaagggcctggagtacccg
ctggtgttcctgcccttcatcgccgccttccgcccggtgaaggccggcgacctgccgctg
cgctggcacgacgacgacggcaacctgcgcctctccctggacgccgacgaggccatcctg
gcccgggccgaccgcgagcggctgggcgaggacctgcgcaagctctacgtggccctgacc
cgcgcccgccacgccacctggatcggcctggcaccgctggaggccatggagcgcagcgcc
gtcggccacctgctctccggtggcgagccgctgccccccgaggccctgcgcccggccctg
gaggccctggccgacaagaaagccgacgactccggccgggtgcgggtgaccgaggccccg
gcggccgatcccgccccggtgcacctggccaccgagacggaggcgctaggggaggcccgc
gcgcccacccggaccatccgcgagcactggtggatcgccagctactcggcgctgcgtgcc
ggggccaccccggacgaggcaggcccagagaccgccgccgaggccgaaccagcccccgag
cccaccaccgccgacgaggccacggcgatggaggtgatcgacgagcccttcgatgccggc
gccgccgcggtgagcgagggctcgcttcatcgcttcccccgcgggccctcggcgggcacc
ttcctgcacggcctgctggaatgggccggagaggagggcttcgccaaggtggccgaggac
gccgcgctgcgcgaggacaccctggcccggcgcgccaaccgccgcggctgggagggccag
atcgaagcgctttcgcagtggctgccggagctgctgaccacgccgttgccggtgccggat
gaggccgccccgctacgcctcgatgcgcttgccggctaccgggtggagctggaattctgg
ttcgccgcccacaaggtcgacacgagaaggctcgacgccctcgtgagcgcttacacactg
ggtggccggccccggccggcgctggagcccgacaccctcaacggcatgctcaagggcttc
atcgacctggtggtggagcactgggggcgcttctacgtgctcgactggaagtccaaccac
ctgggcgccgacgatgccgcctacaccgaggcggcgatggccgaggccgtgctcgagaag
cgctacgacgtgcagtactgcctctacctgctggccctgcaccggctgctccaggcccgg
ctgccggactacgaccccgagcgccacctgggcggggccctctacgtcttcctgcgcggc
acccgcgcgccctcacggggcgtgcacgccgaacgcccgccgagcgagctgatcctcgcg
ctcgatgccctgttccgcgccgccgaggaggacgccgcatga
DBGET
integrated database retrieval system
