Halomonas beimenensis: BEI_0811
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Entry
BEI_0811 CDS
T05125
Name
(GenBank) DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03030
DNA replication
hbe03430
Mismatch repair
hbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEI_0811
03430 Mismatch repair
BEI_0811
03440 Homologous recombination
BEI_0811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbe03032
]
BEI_0811
03400 DNA repair and recombination proteins [BR:
hbe03400
]
BEI_0811
Enzymes [BR:
hbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BEI_0811
DNA replication proteins [BR:
hbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BEI_0811
DNA repair and recombination proteins [BR:
hbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BEI_0811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATJ81798
UniProt:
A0A291P4K0
LinkDB
All DBs
Position
864054..864776
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AA seq
240 aa
AA seq
DB search
MLGLPRGRAQVPDWRGFVSSRASAPRDPRLARFFAAGVPAPETPIAETPLVALDMETTGL
DARRNSIVSIGLVPFTLERIGLTGRRYWIVRPRRPLSAKSVTFHHITHADIAQAPELDDI
LGELLEALAGRLAVVHYRHIERPFLDVAVKARLGEGVMFPVIDTMSLEARIHRQSLLARF
KRWMGRPPASIRLYDSRERYGLPPYQGHHALTDALATAELLQAQIAHHYSPEIPIGAIWS
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgctagggttacccaggggaagggcgcaggtacccgactggcgcggcttcgtctcgagc
cgggccagcgccccgcgggatccacgcctggcgcgcttcttcgccgccggagtaccggcg
ccggagacgcccatcgccgagacgccgctggtggcgctggacatggagaccaccggactc
gacgcccgccgcaactccatcgtcagcatcggcctggtgcccttcacgctggaacggatc
ggtctgaccggccgtcgctactggatcgtgcgcccgaggcgcccgctcagcgccaagtcg
gtgaccttccatcacatcacgcatgccgacatcgcccaggccccggaactggacgacatc
ctcggcgagctgctcgaggccctggccggtcgcctggcggtggttcattaccgccacatc
gagcgccccttcctggacgtcgcggtgaaggcgcggctcggcgagggggtcatgttcccg
gtgatcgacaccatgtcgctggaggcacgcatccatcgccagtccctgctggcccgcttc
aagcgttggatggggcgcccgccggcctcgatccgcctctatgacagccgagaacgctac
ggcctgccgccctaccaggggcatcatgccctcaccgacgccctggccacggcggaactg
ctgcaggcccagatcgcccatcattacagtcccgaaatccccatcggggcgatctggagc
tga
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