KEGG   Halomonas beimenensis: BEI_1880
Entry
BEI_1880          CDS       T05125                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
hbe  Halomonas beimenensis
Pathway
hbe03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hbe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BEI_1880 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hbe03400]
    BEI_1880 (uvrB)
DNA repair and recombination proteins [BR:hbe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BEI_1880 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BEI_1880 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 DUF87 Kinesin Microtub_bd
Other DBs
NCBI-ProteinID: ATJ82867
UniProt: A0A291P7L2
LinkDB
Position
complement(1965066..1967093)
AA seq 675 aa
MSKPFRLQSRYRPAGDQPTAIQGLVDGLEAGLAHQTLLGVTGSGKTYTMANVVERLQRPT
IVMAPNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRSFLRRLAELQ
YTRNDMDFKRGTYRVRGDVIDIFPADAEDEAVRVELFDDEIDAISLFDPLTGESRGKVPR
MTIYPKSHYVTPRETILGAIDAIKEELAERLAWLRRHDRLVEAQRLEQRSLYDIEMMLEL
GYCNGIENYSRYLSGRAPGEPPPTFFDYLPADALLFIDESHVSVPQVGGMYKGDRSRKET
LVEYGFRLPSALDNRPMTFQEWERICPQTVFVSATPGPYEAEHAGQVVEQVVRPTGLLDP
ELEVRPASTQVDDLLSEIRTRAAAEERVLVTTLTKRMAEDLTEYLDEHDVRVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNERSLIQTIGR
AARNAHGKAVLYADRVTDSMRRAIDETERRRAKQIAHNEAHGIVPETVSRSVADILEAGE
APGRRGKGRRTERKVAEGAAVYDPEDLGPEELVREITRLEDAMHEAAQNLEFEEAARLRD
RLLELKERRLALGQA
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgagcaagccgttccgactccagtccagataccggcccgccggggaccagcccacggcc
atccagggcctggtcgacggtctcgaggccgggctcgcccaccagaccctgctgggggtc
accggctcgggcaagacctacaccatggccaacgtggtggaacgcctgcagcgcccgacc
atcgtcatggcgcccaacaagaccctggcggcccagctctacggtgagttcaaggcgttc
ttccccgacaacgccgtggagtacttcgtctcctactacgactactaccagcccgaggcc
tatgtgccgtcctcggacaccttcatcgagaaggatgcctcgatcaacgaccacatcgag
cagatgcggctctcggcgaccaaggcgctgctggagcgccgcgatgccctgatcgtggtc
tcggtatcggccatctacggcctgggcgatccggaccagtacctcaagatgcgcctgcac
ttcacccggggggagctgatcgaccagcgttccttcctgcgccgcctggcggagctgcag
tacacgcgcaacgacatggacttcaagcgcggtacctatcgggtgcggggcgacgtcatc
gatatcttcccggcggacgccgaggacgaggcggtgcgggtcgagctgttcgacgacgag
atcgatgccatcagcctcttcgatccgctgaccggcgagtcccgcggcaaggtgccgcgc
atgaccatctaccccaaatcgcactacgtgacgccgcgggagacgatcctcggcgccatc
gatgccatcaaggaggagctcgccgagcgtctggcctggctgcgccggcacgacaggctg
gtggaggcccagcgcctcgagcagcgctcgctgtacgacatcgagatgatgctggaactg
gggtactgcaacggcatcgagaactactcccgctacctgtccggacgagccccgggcgag
ccgccgccgaccttcttcgactacctgcccgccgatgccctgctgttcatcgacgagtcc
cacgtcagcgttccccaggtgggcggcatgtacaagggcgaccgttcgcgcaaggaaacg
ctggtggaatacggcttccggctgccctcggcgctggacaaccggccgatgaccttccag
gaatgggagcgcatctgtccgcagaccgtcttcgtctcggccaccccgggaccctacgag
gccgagcatgccggtcaggtggtggagcaggtggtgcggcccaccgggctgctggatccc
gagctcgaggtgcgtccggcctcgacccaggtggacgacctgctctccgagatccggacc
cgggccgcggcggaggagcgggtgctggtcaccaccctgaccaagcgcatggcggaggac
ctcaccgagtacctggacgagcacgacgtccgggtgcgctacctgcactccgacatcgac
accgtggaacgggtggagatcatccgcgacctgcgactcggcaagttcgacgtcctggtg
ggcatcaacctgctgcgcgaggggctggacatccccgaggtctcgctggtggccatcctc
gacgccgacaaggaagggttcctgcgcaacgagcgctcgctgatccagaccatcggccgg
gccgcgcgcaacgcccacggcaaggccgtgctctacgccgatcgggtcaccgactccatg
cgccgggccatcgacgagaccgagcggcgtcgtgccaagcagatcgcccacaacgaggcc
catggcatcgtgcccgagacggtcagccgttcggtggccgacatcctcgaggcgggcgag
gcgccggggcgcaggggcaaggggcgcaggaccgagcgcaaggtggccgagggcgccgcc
gtctacgatccggaggacctggggccggaggagttggtgcgagagatcacgcggctcgag
gacgccatgcacgaggccgcccagaacctggagttcgaggaggccgcccggctgcgcgat
cggctcctcgagctgaaggaacgccggctggcgctgggccaggcctga

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