Halomonas beimenensis: BEI_2643
Help
Entry
BEI_2643 CDS
T05125
Symbol
deaD
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hbe
Halomonas beimenensis
Pathway
hbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEI_2643 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbe03019
]
BEI_2643 (deaD)
03009 Ribosome biogenesis [BR:
hbe03009
]
BEI_2643 (deaD)
Enzymes [BR:
hbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BEI_2643 (deaD)
Messenger RNA biogenesis [BR:
hbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BEI_2643 (deaD)
Ribosome biogenesis [BR:
hbe03009
]
Prokaryotic type
rRNA helicases
BEI_2643 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
AAA_30
HEM4
Motif
Other DBs
NCBI-ProteinID:
ATJ83630
UniProt:
A0A291P9Q8
LinkDB
All DBs
Position
complement(2792171..2793865)
Genome browser
AA seq
564 aa
AA seq
DB search
MTSTSVASPSFGDLALLPTVLSAIETLGYQTPSPIQAQTIPALLEGRDMLGQAQTGTGKT
AAFALPLLSRLDLERRAPQVLVMAPTRELAQQVAVSFSKYGQNLKGLEVATLCGGMEYRD
QLQALKRGAQVVVGTPGRIIDHLDRGSLKLDGLSALVLDEADEMLRMGFIDDVKRVVADT
PQDAQRVFFSATLPTEIERIVNRYLVDPVKVAIESRTTTGENIEQRRVRVEGGAKLEALA
RIIEVEPVDAAIVFVRTRAACTTLMEQLSARGVNVASLSGDLDQSLRERTITRLKRGKVD
VLIATDVAARGLDVPRITHVINYDLPQDAEAYTHRIGRTGRAGRDGVAITFAGNREGRKI
GWLEQATGQKMSEMALPDEAAIRAHRDEVFHQRVVAALTKGADEQRALVERLVAEGHDPI
ELACAFAAMARADEAPIGRLQAPRKERSERAPRDGKPPRRERGPSEGMTRYRVSVGHKDG
VKPGQLVGALANEGGIEGNRIGRIDIRNAFSVVELPSGLPSSILAKMGRARVAGRPLEIS
EDRAPERAPRRRRDDDGPIRRERA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacttccgtcgcctcgccgagtttcggcgatctggccctgctgcctaccgtt
ctctccgccatcgagaccctcggctaccagactccgtcgccgatccaggcacagaccatt
ccggccctgctggaaggccgcgacatgctgggccaggcccagacgggcaccggcaagacc
gccgccttcgccctgccgctgctctctcgcctcgacctcgagcgccgcgcgccccaggtg
ctggtgatggcgccgacccgcgagctggcccagcaggtggcggtctccttcagcaagtac
ggccagaacctcaagggcctggaagtggcgacgctgtgtggcggcatggaataccgcgac
cagcttcaggcgctcaagcggggcgcccaggtcgtggtcggcacccccggccggatcatc
gatcacctggatcgcggcagcctcaagctggacggcctgtccgccctggtgctcgacgag
gccgacgagatgctgcgcatgggcttcatcgacgacgtcaagcgcgtggtcgccgacact
ccccaggacgcccagcgggtgttcttctccgcgaccctgcccaccgagatcgagcgcatc
gtcaaccgctatctggtggatccggtcaaggtggccatcgagtcccgtaccaccaccggc
gagaacatcgagcagcgccgcgtgcgcgtggaaggcggcgccaagctcgaggccctggca
cgcatcatcgaggtcgagccggtggatgccgccatcgtcttcgtgcgtactcgggccgcc
tgcaccaccctgatggagcagctctccgcccggggcgtcaacgtggccagcctgtccggt
gacctggaccagagcctgcgcgagcgcaccatcacccgcctcaagcgcggcaaggtggac
gtgctgatcgccaccgacgtggcggcccgtggcctggacgtgccgcgcatcacccacgtc
atcaactacgacctgccccaggacgccgaggcctacacccaccgcatcggccgtaccggc
cgggccggtcgcgacggcgtggcgatcaccttcgccggcaaccgcgagggccgcaagatc
ggctggctggagcaggccaccggccagaagatgagcgagatggccctgcccgacgaggcc
gccatccgcgcccaccgggacgaagtcttccaccagcgcgtggtcgcggccctgaccaag
ggcgccgacgagcagcgtgccctggtggagcgtctggtcgccgaaggccatgatcccatc
gagctggcctgtgccttcgccgccatggcccgcgccgacgaggcccccatcggccgcctg
caggctccccgcaaggagcgcagcgagcgtgcgccccgtgacggcaagccgccgcgccgc
gagcgtgggcccagcgagggcatgacccgctaccgcgtctccgtgggccacaaggacggc
gtcaagcccggccagctggtcggcgccctggccaacgagggcggcatcgagggcaaccgc
atcggccggatcgacatccgcaatgccttctccgtcgtcgagttgccgagcgggctgccg
tccagcatcctggccaagatgggccgcgcccgggtcgccggccgtccgctggagatcagc
gaggaccgcgctcccgagcgggcgccgcgtcgtcgccgcgacgacgacggcccgatccgt
cgcgagcgggcctga
DBGET
integrated database retrieval system
