Halomonas beimenensis: BEI_3198
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Entry
BEI_3198 CDS
T05125
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hbe
Halomonas beimenensis
Pathway
hbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEI_3198 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbe03021
]
BEI_3198 (rho)
03019 Messenger RNA biogenesis [BR:
hbe03019
]
BEI_3198 (rho)
Transcription machinery [BR:
hbe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BEI_3198 (rho)
Messenger RNA biogenesis [BR:
hbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BEI_3198 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
AAA
Fungal_virus_P2_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATJ84185
UniProt:
A0A291PBD8
LinkDB
All DBs
Position
complement(3397729..3398988)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKPVPELLEIAREMGIDNLARSRKQDIIFAILKKHAKSGEAIYGDGVLEILQD
GFGFLRSADSSYMAGPDDIYVSPSQIRRFNLRKGDSISGKIRPPKEGERYFALLKVSEIN
FDKPENAKHKILFENLTPLFPQERLRMEIGNGSTEDLTARIIDLTAPIGKGQRGLLVSPP
KAGKTLMLQNIATSITRNNPECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAEKRVYPALNI
RRSGTRREDLIASEEEMQRMWILRKLLNPMEDVAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaactcaagcaaaagcccgtgccggaactcctggagatcgcccgtgaa
atgggcatcgacaacctggcacgctcccgcaagcaggacatcatcttcgccatcctcaag
aagcacgccaagagcggcgaggccatctacggggacggcgtcctggagatcctgcaggac
gggttcggcttcctgcgtagcgccgacagttcctacatggccggcccggatgacatctat
gtgtcgccctcccagattcggcgcttcaacctgcgcaagggcgactccatctccggcaag
attcgtccgcccaaggaaggggagcgttacttcgcgctgttgaaggtcagcgagatcaac
ttcgacaagccggagaacgccaagcacaagatcctcttcgagaacctcacgccgctgttc
ccccaggagcggctgcgcatggagatcggcaacggctccaccgaggacctcacggcacgg
atcatcgacctcaccgcccccatcggcaagggccagcgtggcctgctcgtctcgcccccc
aaggcgggcaagacgctgatgctgcagaacatcgcgacctccatcacccgcaacaacccc
gagtgccatctcatcgtgctgctgatcgacgagcggcccgaggaagtgaccgagatgtcg
cggacggtgcgtggcgaggtggtggcgtccaccttcgacgaaccgccggcccgtcacgtc
caggtggccgagatggtcatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtgatcctgctcgactccatcacccgcctggcccgagcctacaacaccgtggtgccgagc
tccggcaaggtgttgaccggcggtgtcgacgcccacgccctggagaagcccaagcgcttc
ttcggcgcggcgcgcaacatcgaggagggcggcagcctgaccatcatcgccacggcgctg
gtcgataccggctccaagatggacgaggtgatcttcgaggagttcaagggcaccggcaac
atggaggcccacctggaccgcaagctcgccgagaagcgcgtctacccggccctcaacatc
cgccgctccggtacccgccgcgaggacctgatcgcctccgaggaggagatgcagcgcatg
tggatcctgcgcaagctgctcaaccccatggaggacgtggcggccaccgagttcctgatc
gaccgcctgaaggataccaagactaacctcgagttcttcgaggccatgaagcggcgttga
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