Halomonas binhaiensis: E4T21_01480
Help
Entry
E4T21_01480 CDS
T08791
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03030
DNA replication
hbh03410
Base excision repair
hbh03420
Nucleotide excision repair
hbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E4T21_01480 (polA)
03410 Base excision repair
E4T21_01480 (polA)
03420 Nucleotide excision repair
E4T21_01480 (polA)
03440 Homologous recombination
E4T21_01480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbh03032
]
E4T21_01480 (polA)
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_01480 (polA)
Enzymes [BR:
hbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E4T21_01480 (polA)
DNA replication proteins [BR:
hbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E4T21_01480 (polA)
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E4T21_01480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4T21_01480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QEM80374
UniProt:
A0A5C1NB43
LinkDB
All DBs
Position
359329..362094
Genome browser
AA seq
921 aa
AA seq
DB search
MASSPIVLVDGSSYLYRAFHALPPLTTSKGQPTGAIKGVLNMLKSLRKDYPDSPMAVVFD
APGKTFRDELFAEYKAQRPSMPDDLRVQIKPLHDCVKALGLPLLCIEGVEADDVIGTLAR
HATEAGRDAVISTGDKDMAQLVNGHITLVNTMKNETLDVAGIKEKYGLPPELIIDYLALM
GDKIDNIPGVPGVGEKTALGLLQGMDGGLDTIYADLDKVKTLSFRGAKTLSGKLEEHRDM
AYLSYQLATIKTDCELAISLDELVVGEEDNEALIELYRELEFRTWLESLLKGQSQKGGTA
SPSGDHDDDTASERGSSSTRQDVTILEQAQLDEWLKRLKKAEAFCFDLETTSLDYMEADI
VGIGLALEPGEAAYIPLAHDYLDAPPQLDRKAVLQALAEVLGDAGIAKIGQNLKYDISVL
ARYDIAVKGELIDTMLESYVLDSTATRHDMDSLALKYLGESTIKFEDIAGKGAKQLTFNQ
IALEQAVPYACEDVDITLRLHRELRPRLEKTGRVSEVLDRLERPLIRVLSAMERNGVALD
VERLHTQTQELGKRIQELEARAYELAGREFNLGSPKQLGQILFEEQGIPVIKKTPKGAPS
TAEAVLEELALDYPLPKVIMEHRGLSKLRSTYTEKLPKLVNKATRRLHTSYHQAVAATGR
LSSTDPNLQNIPIRTEEGRRIRQAFIARPGYRIVAADYSQIELRIMAHLSGDKGLLSAFS
ENRDIHAATASEVFGVALDQVSADQRRSAKAINFGLIYGMSAWGLGRQLHIEQSQAKTYI
DRYFDRYPGVARYMERIRAQAAEDGFVETLFGRRLYLPEIHSQNRARRQGAERTAINAPM
QGTAADIIKSAMIDVDTWLRDNVEFDAWMVMQVHDELVFEVREDQVEAFMAEVKQLMQNT
VTLDVPLTVEAASGANWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcctctagccccatcgttctcgtcgacggttcctcctatctataccgcgccttccat
gccttgcctcctctgaccacatccaagggtcagcctaccggggccatcaagggtgtgctc
aacatgctcaagagcctgcgcaaggactatccggatagccccatggcggtggttttcgat
gctccaggaaagacctttcgtgatgagctgttcgcggagtacaaggcccagaggccttcg
atgcctgatgatctgcgcgtccagatcaagccgttgcatgactgcgtgaaagccctggga
ctgccattgctgtgcattgaaggcgtcgaggccgatgacgtcatcggcacgctggcccgg
catgcgaccgaagctgggcgtgacgccgtgatttccacgggtgacaaggacatggcccag
ttggtcaatggccatatcaccctggtcaacaccatgaagaatgagacgctggacgtcgcc
gggatcaaggaaaagtatggcctgccgccagaactgatcatcgactacctggccttgatg
ggagacaagatcgataacattccgggcgtgcccggagtaggggaaaagacggcgctgggc
ctgttgcaaggcatggatggagggctcgataccatctatgcggatctcgacaaggtcaag
acactgtccttccgtggtgccaagaccttgtccgggaagctcgaagaacatcgcgacatg
gcctatctgtcgtaccagctcgccaccatcaagaccgactgcgagctggcgatcagcctg
gatgagctggtggttggcgaggaggataatgaggccctgatcgagctctaccgggagctg
gagttcaggacctggcttgagtcactgctcaaggggcagtcccagaagggggggacggcg
tccccgtccggcgatcacgacgacgatactgcatcggagagaggttccagcagcacgcgc
caggatgtcaccatccttgaacaggcccagctcgatgaatggttgaagcgcctcaagaag
gccgaggcattctgctttgatctggagacgaccagcctggactacatggaagcggatatt
gtcggtatcggcctggctctggaacctggcgaagctgcctatattcccctggcccacgac
tatctcgatgccccgccccagctggaccggaaggcggtattgcaggcattggctgaggtg
ttgggcgatgctgggattgccaagatcggtcagaacctcaagtacgatatttcggtgctg
gctcgctacgacatcgcggtcaagggcgaattgatcgataccatgctcgagtcctatgtg
ctcgactctactgccactcgccatgatatggattctctggcattgaagtatctgggcgag
agtacgatcaagttcgaggatattgcgggcaagggcgccaagcagttgaccttcaaccag
attgcgctggaacaggcggttccctacgcgtgcgaggatgtcgacatcaccttgcgcctg
caccgcgaactgcgcccaagactggagaagaccggccgtgtgtccgaggtgctggatcga
ttggagagaccattgatccgagtgctgtcggccatggagcgcaatggtgtggcattggat
gtggagcgcctgcatacccagacacaggagctgggcaagcgcattcaggagctggaagcc
cgggcctacgaactggccgggcgtgagttcaatctgggctcacccaagcaactgggacag
atcctgttcgaggaacagggcattccggtcatcaagaagacccccaaaggggctccgtcg
accgcggaagcggtgctggaagagctggccctggactatccgctgcccaaggtgatcatg
gagcatcgtggactttccaagttgcgctcgacctatacagagaagctgcccaagctggtc
aacaaggccacgcgtcgcctgcacaccagctatcaccaggccgtggctgccacgggacgt
ctgtcgtccaccgaccctaacctgcagaacattcctatccgaaccgaggaagggcggcgt
atccgccaagccttcatcgcccggcctggctatcgtatcgttgccgcggattactcccag
atcgagttgcgtatcatggctcacttgtctggtgacaagggacttctctctgcgttttcc
gagaaccgggacatccatgcagccactgcttcagaggtgttcggtgtcgcactggatcag
gtcagtgctgaccagcgtcgcagtgccaaggcgatcaatttcggtctgatatacggtatg
agtgcctggggactgggccgtcagttgcatatcgaacagagccaggccaagacctacatc
gatcgctatttcgatcgctatcctggtgtggcgcggtatatggagcgtattcgtgcccag
gctgccgaggacggtttcgtcgagacgctgttcggtcgccgcctgtatctgccagagatc
cactcgcagaaccgtgcccgtcgccaaggggctgaacggactgcaatcaatgcaccgatg
cagggcacggctgcggatatcatcaagagtgccatgatcgacgtggatacgtggctgcgt
gataacgtcgagtttgatgcctggatggtgatgcaggttcacgatgaactggtgttcgag
gtgcgtgaagatcaggtcgaagccttcatggccgaggtcaagcagctcatgcagaacacc
gtcactctggatgttcccttgaccgtggaagcggcgagtggtgccaattgggatgaggca
cactag
DBGET
integrated database retrieval system