Halomonas binhaiensis: E4T21_01985
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Entry
E4T21_01985 CDS
T08791
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E4T21_01985 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbh03021
]
E4T21_01985 (rpoA)
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_01985 (rpoA)
Enzymes [BR:
hbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E4T21_01985 (rpoA)
Transcription machinery [BR:
hbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E4T21_01985 (rpoA)
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E4T21_01985 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
QEM80461
UniProt:
A0A5C1NBX8
LinkDB
All DBs
Position
457547..458545
Genome browser
AA seq
332 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGCAVVEAE
IAGVDHEYSAIEGVQEDVIEILLNLKDVAVKMHSRDEAVLSLNKQGPAVVTAGDIAVDHD
VEIVNPAHVIAHINEGAELKMQLKVARGRGYEPADVRSEAEDESRAIGRLQLDATFSPVR
RVSYAVEAARVEQRTNLDKLVIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQE
VVEEEDHIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLN
EIKDVLAARGLSLGMRLENWPPASLKDDKATA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttctccgtcctcgtgacatcaaggtcgaagagattagc
gcacatcacgcaaagatcgtgcttgagccgttcgagcgtggcttcggccataccctcggc
aacgctctgcgtcgtatcctgctttcttccatgccaggctgtgccgtggtggaagccgaa
attgcaggcgtggaccacgagtacagtgcgatcgaaggcgtacaggaagatgtcatcgaa
atcctcctgaacctcaaggatgtggcggtcaagatgcacagccgcgatgaggcggtgctc
tcgctgaacaagcagggccccgccgtcgtcactgcgggagatatcgccgtcgatcatgac
gtcgagatcgttaatcctgcgcatgtcatcgcacacatcaatgaaggcgccgagctgaaa
atgcagctcaaggtggcccgtggtcgtggctatgagcctgcggatgtccgcagcgaagcc
gaagatgaatcacgtgccatcggtcgcctgcaactggatgcgaccttcagccctgtgcgt
cgcgtttcctatgctgtcgaggccgctcgtgtagagcaacgaactaacctcgacaagctg
gtcattgacctggaaaccgatggcaccctggatccggaagaggccattcgtcgtagtgcg
accattctgcaagagcagctggccgccttcgtcgacttggaagctgacaaggaacaggaa
gtggtggaggaagaggatcatatcgatcccatcctgttgcgccctgtagacgatctcgag
ttgaccgtccgtagtgccaactgcctcaaggccgagaatatttactacatcggtgatctg
attcagcgcacagaagttgagctgttgaagaccccgaatctcggcaagaagtccttgaat
gaaatcaaggatgtgttggcagcacgtggtctgtccctcggcatgcggcttgaaaattgg
ccgccggctagcctgaaggacgacaaggccacggcctga
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