Halomonas binhaiensis: E4T21_04120
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Entry
E4T21_04120 CDS
T08791
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hbh
Halomonas binhaiensis
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbh03016
]
E4T21_04120
Enzymes [BR:
hbh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
E4T21_04120
Transfer RNA biogenesis [BR:
hbh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4T21_04120
Prokaryotic type
E4T21_04120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QEM80828
UniProt:
A0A5C1NED3
LinkDB
All DBs
Position
948002..949096
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AA seq
364 aa
AA seq
DB search
MRDDIAWPPQWPRRFDVDFGAPRAGRYRETVEDFDVEECLGFEPEGQGEHLWLWIEKRDA
TTAMVARELARLCDVGQRDIGYAGMKDRFAVTRQWFSVHLPGREAPEGLVEALQARGLRA
ERLDRHPRKLKRGVHRGNRFRLRLSGDVTLDENLEQRWRTLLTKGVPNYFGPQRFGPDGR
NLVRARDVLDRGWRKRDDRDGMLLSTARSYLFNAQLAERLARGQWDEVLEGDVMMLEGTH
SLFQAEADDDSLHQRLASGDIHPTAVLWGQGGSRAAARALQLEQDVLARTPGLCQGLEKA
GAKAARRALRVIPGEASLERGDGEIWLSFELPSGAYATAVLRELMANPSLEFRPDSVRRQ
GEEK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgacatcgcctggccaccgcagtggccacgccgctttgacgttgatttcgga
gcgcctcgggctggccgctatcgcgagacagtggaagactttgatgtcgaggagtgtctg
gggttcgagcctgaaggtcagggcgagcatctgtggttgtggatagagaaacgagatgcc
accactgccatggtcgcccgggagctggcgcgattatgtgatgtcggccagcgtgatatc
ggctatgccggcatgaaggaccgcttcgcagtcactcgccaatggttttcggtgcacttg
cctgggcgcgaggctcccgaaggccttgtcgaggccttgcaggcaagagggctgcgagcg
gaacgtctggatcgccatccgcgcaagctcaagcgcggagtgcatcgaggcaaccgcttt
cgtctgcgtctgagtggggacgtgacgctggatgaaaaccttgaacagcgctggcgcact
ctgctgaccaaaggggtgcccaactattttggcccgcagcgctttggcccggatgggcgc
aatctggttcgtgccagggatgtgctcgacaggggctggcgcaagcgcgatgaccgtgat
ggcatgttgctttccaccgcacgtagttacctgttcaatgcgcagttggccgagcgtctg
gccaggggccagtgggacgaggtactggaaggcgacgtgatgatgctggaaggcacccat
agtctgtttcaggccgaggcggacgatgattccctgcatcagcgcctggcaagcggcgat
attcatccgaccgcggtattatgggggcaaggtggttcacgcgctgctgcacgggctttg
caactggaacaggatgtgctcgcacgtactccaggcttgtgccaaggccttgaaaaggcc
ggggccaaggctgccaggcgtgcattgagagtgatccctggcgaggccagcctggagcgc
ggtgatggagagatatggctgagtttcgagctacccagtggtgcctatgctacggcggta
ctgcgtgaactgatggcgaatccaagcctggagttccgccccgacagtgtgcggcgccag
ggggaagaaaaatga
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integrated database retrieval system
