Halomonas binhaiensis: E4T21_07495
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Entry
E4T21_07495 CDS
T08791
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T21_07495 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbh03019
]
E4T21_07495 (rhlB)
Enzymes [BR:
hbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4T21_07495 (rhlB)
Messenger RNA biogenesis [BR:
hbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4T21_07495 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_30
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
QEM81399
UniProt:
A0A5C1NI40
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All DBs
Position
1718197..1719471
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AA seq
424 aa
AA seq
DB search
MSESEQTSTPAESHKPKRRRRKPRRRQSNWDLRQFKVPAVAGKWRFHDFDLPLPLMRAIH
TLGFEYCTPIQAEALTQTLLGGDVVGKAQTGTGKTAAFLISMLAYFLEEETPDGQKSGAP
RALILAPTRELALQIEKDAKALARYTSLKVTSVVGGMDYQKQRDGLNGPVDILVATPGRL
LDFHQKRDIDLSQVEVLVLDEADRMLSMGFIPDVKRIIRYTPKPQERQTFLFSATFTEDI
LNLASQWTHEPAHVEIAVSVENAADIDQRVYMVGDADKQRLLVKLLQQEDFERVMVFGNR
RDLVRNLLDLLKKADINVAMLSGDVAQNQRIRTLEQFREGEVQVLVATDVAGRGIHIDDV
SHVINYTLPEDPEDYVHRIGRTGRAGAKGVSISFVGEEDAFSLPEIERFIGDKLPCEHPP
EGLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaacagacctccacaccggccgagagccataagcccaagcgccgtcgt
cgcaagccgcgtcgtcgtcaatcgaattgggacctgcgccagttcaaggtacctgctgtc
gcgggtaagtggcggttccatgacttcgatctgccgctgccgctgatgcgtgccattcac
acgctgggctttgagtactgcacaccgatccaggccgaagccttgacccagactctgctg
ggaggtgatgtcgttggcaaggcgcagaccggtactggcaagacagccgctttcctgatt
tccatgctggcctacttcctcgaagaggaaacaccagatgggcagaagtcgggcgcgccc
cgtgcgttgatcctggcaccaacccgggagctggctttgcagatcgagaaggatgccaag
gcactggcacgctacacctcgctgaaggtgactagtgtcgtgggtggcatggactaccag
aagcaacgtgatgggctaaatggcccggttgatattctggtggccacgccaggccgcctg
cttgatttccatcagaagcgtgatatcgatctcagccaggtcgaagtcctggttctggat
gaggccgaccgcatgctgtcgatgggcttcatcccggacgtcaagcgcatcattcgttat
acgcccaagcctcaggagcgacagaccttcctgttctccgcgacgtttaccgaagatatc
ctcaacctggccagccagtggacccatgaaccggcccacgtggaaatcgccgtgtctgtc
gaaaacgctgccgatattgatcagcgtgtctatatggtcggtgatgctgacaagcagcgc
ttgctggttaaattgctgcagcaggaagacttcgagcgcgtgatggtgttcggcaatcgt
cgcgatctggtgcgcaacctgcttgatctgctcaagaaagccgatatcaatgttgccatg
ctgtctggcgatgttgctcagaaccagcgtattcgcacactggagcagttccgagagggc
gaagtgcaggtcctggtagcgacagatgtagcgggtcgtggcattcatatcgatgatgtc
agccatgtgatcaactacaccttgccggaagatcctgaagactacgtgcatcgtattgga
cgtaccggccgcgcaggtgccaagggagtctccatcagttttgtcggtgaagaggatgcg
ttctccctgccggagatcgagcgcttcatcggtgacaagctgccgtgtgagcatccgcct
gaaggcttgctgtaa
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