Halomonas binhaiensis: E4T21_10140
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Entry
E4T21_10140 CDS
T08791
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4T21_10140 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_10140 (uvrB)
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4T21_10140 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E4T21_10140 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
AAA_5
Kinesin
UB2H
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QEM84020
UniProt:
A0A5C1NME3
LinkDB
All DBs
Position
complement(2312752..2314782)
Genome browser
AA seq
676 aa
AA seq
DB search
MSKPFRLASKFRPAGDQPAAIEGLVNGLEAGLAHQTLLGVTGSGKTFTMANVVERLQRPT
IVMAHNKTLAAQLYGEFKAFFPDNAVEYFVSYYDYYQPEAYVASSDTFIEKDASINDHIE
QMRLSATKALLERRDALIVVSVSAIYGLGDPDQYLKMRLHFTRGELIDQRGFLRRLAELQ
YTRNDMDFKRGTYRVRGDVIDIFPADSEDQAVRVELFDDEIDTISLFDPLTGEVQGRVPR
MTIYPKSHYVTPRETILGAVDQIKEELVERLAFLRKEDRLVEAQRLEQRTLYDIEMMNEL
GYCNGVENYSRYLSGRAPGEPPPTFFDYLPPDALLFIDESHVSVPQVGGMYRGDRSRKET
LVEYGFRLPSALDNRPMTFEEWEGICPQTIFVSATPGPYEAEHAGQVVEQVVRPTGLLDP
EIEVRPASTQVDDLLSEIHLRTVVGERVLVTTLTKRMAEDLTEYLDEHDVKVRYLHSDID
TVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGR
AARNANGKAILYGDRITDSMRKAMDETERRRAKQKAHNEEHGITPRTVTRSVADILEAAA
APGSRKSRGRKGERKVAEPEGIYDPASLSPEELRKEMSRLEDAMLQAAQNLEFEEAARLR
DRLHELQERQLALGAI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccgtttcgcctcgcttccaagttccgtcctgccggtgaccaaccggcagct
atcgaggggctggtcaatgggctggaggcaggtctggcccaccagaccctgctcggtgtt
accggctcaggcaagaccttcaccatggccaatgtggtggagcgtttgcagcgcccaacc
attgtcatggcacataacaagacattggctgctcagctttatggcgaattcaaggcattc
ttccctgacaatgcggtggagtatttcgtttcctattacgactactaccagcccgaggct
tatgtggcgtcgtcggataccttcatcgagaaggatgcctccatcaatgatcatatcgag
cagatgcgcctgtctgcgaccaaggcattgctggaacgccgtgatgcactgatcgttgtc
tcggtgtcggccatttatggcctgggtgatccggaccagtacctgaagatgcgtctgcac
ttcactcgtggcgaactgatcgaccagcgaggcttcctgcggcgtctggccgagttgcaa
tacactcgcaacgatatggatttcaaacgcggcacctatcgggtgagaggggatgtcatc
gacattttcccggcagactccgaggatcaagcggtaagggtggaattgttcgacgatgaa
atcgacacgatcagcctgttcgatccactgaccggtgaagtgcagggcagggtgcctcgc
atgaccatctacccgaagagccactatgtgacaccacgggagaccatccttggcgcagtg
gatcagatcaaggaggaactggtggagcggctcgcgttcctgcgcaaggaagatcgactg
gtggaagcccagcgccttgagcaacgtacgctctacgacatcgagatgatgaatgagctg
ggttactgcaacggtgtcgagaattactcacgctacttgtccgggcgtgctcccggcgaa
ccaccgcccaccttctttgactacctgccgccggatgctctgttgttcatcgatgagtcc
catgtcagcgtaccgcaggtcggtggcatgtatcgtggtgaccgttcgcgcaaggaaacg
ctggtggaatacggcttccgtctgccttcggcgctggataaccgtccgatgacattcgag
gaatgggaagggatttgcccgcagaccattttcgtttctgccacaccggggccctatgag
gccgagcatgccggtcaggtggtcgaacaggtcgtgcgtcctacgggattgctggatcca
gaaatcgaggtgcgcccggcctcgactcaagttgatgacctgctctcggaaatccacctg
cgcaccgtagtaggagagcgggtgttggtgacgaccctgaccaagcgcatggccgaggac
cttaccgagtacctcgacgagcacgatgtcaaggtacgctacctgcactctgatatcgat
acggtggagcgggtggaaatcatccgtgacctgcgcctgggcaagttcgacgtactggtg
ggaatcaacctgctcagagagggcctggatattcctgaagtttccctggtggccattctc
gatgcggacaaggaaggtttcttgcgtgcggaacgttcactgatccagacgatcggtcgg
gcggcacgtaatgccaatggtaaagcgattctatatggcgatcgcatcacggattccatg
cgcaaggccatggacgagacagaacgccgccgggccaagcagaaagcgcataacgaagaa
cacggcatcacgccgcgtacagtgactcgctccgtggcggatattctcgaggcggctgct
gcccctggcagtcgcaagagccgtgggcgcaagggggagcgcaaggttgccgagccagag
ggcatctatgatccggcatccctgtcgccagaggagctgcgcaaggagatgagtcgcctg
gaggatgccatgctgcaagcagcccagaacctcgagttcgaagaagctgcacgcctgagg
gaccgtcttcacgaactccaggaacgtcagctggcgcttggcgcgatataa
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integrated database retrieval system
