Halomonas binhaiensis: E4T21_17395
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Entry
E4T21_17395 CDS
T08791
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E4T21_17395 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_17395 (recC)
Enzymes [BR:
hbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E4T21_17395 (recC)
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E4T21_17395 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QEM83118
UniProt:
A0A5C1NL64
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All DBs
Position
3973339..3976965
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AA seq
1208 aa
AA seq
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MAQSTALTPGFMVIHGNHLEALRDLAVNWMRQHPLGPLENEVLLVQSNGISQWLKLALAA
NPEDGGCGIAAALDVTLPARFLWQAYRTVLTHLDGPDSVPSTSPFDKSRLTWRLMRLLPS
LLDAPDTAEAFTPLKRFLDTDDDQRKRHQLAERLADLFDQYQVYRGDWLEAWSNGDDVLI
DARGQSRPLPQDQHWQAVLWRVLRADIGEAGIASSRAGVHQRFVAACQSLDDSTRPAGLP
RRIMVFGISSLPSQTLEALAALSRMCQVVLCVHNPCEFYWADIIEHRDLLRAARRRQQQR
PGMPLDLDDSQMHLHAHPLLAAWGKQGRDYLRLLDEFDEHQQYAKLFENDALRIDLFEPH
ALPDGRQQLLHQLQDDIRALRPLSETQSLWPAVEKEKDVSLTFHIAHSPLREVEILHDQL
LAAFSADETLRPRDVLVMVPEVDAYAAAVTSVFGRLESDDPRYIPFTLSDQASRHRQPLA
IAVETLTRLPELRLSVSNLLDLLEVPAVRERFAIREDDLPVLERWIAGSGIRWGLDAEQR
QSLDLPGGLSQNTWTFGLRRLLLGYAVGEGAADEPTPAPGQDTAWHDIAPYGDIGGLEAA
LAGPLVRLIDTLEHHWHALSTPTDVGNWCIRLRALLDDCLSPVDDNDSNLLSRLDLALET
WHESAIEADFDGEIPLAVVREQWLTTLDDGGLSQRFLAGAVNVATLMPMRAIPFRHVWLL
GMNDGDYPRTQIPQDFDLMGQDYRPGDRSRREDDRYLFLEALLSARERLSISWVGRSIHD
NSECPPSVLVSQLRDHLARGWQLDESDENGSTALLEHLTTEHPLTPFSPHYFMGQPHLFS
YAHEWRQVHDRDALTDQVIAPLPAWEANAPLTLARLSRLLDDPVATFFNQRLGVRLALPE
SGRLDQEPFALNGLDRWQLQDTLIQAQRRAVDSTEGGEDDRHQARQDALYSTLDRLAREG
HLAMGGFAERMRQHLVEPMDELFELYARTCQRWPHAHQVATPVSLTLGGLEIEDVIDELR
QDADGQRCRVVLLTSSLIRNNRYHWKHWVRPWVVHLVAQICLGPTTTRLLSRVGDGHLPP
LSADEAQSWLGNIATVWHQAMCRPLPLARDSAFAWLRKGGTPAAMSRILEGQSEKADEAA
LDDAWKVLVGNEFQPGEFPRNAYLTRVWAGPEALINEHGNEFAALAESLYGPLSRLARSG
EADNGGNQ
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtcgactgccctcacaccgggattcatggtgatccatggcaatcacctggaa
gcactgcgcgacctggcggtgaactggatgcgccagcatccgctgggaccgctggaaaac
gaggtgctgctggtgcagagcaacggcatcagccaatggctcaagttggcgctggccgcc
aatccggaggacggtggctgcggtatcgcggcggcactggatgtcaccctgccggcgcgt
ttcctgtggcaagcctatcgcacggtgctgacacatttggatggccccgattcggtgcct
tccacatcgcccttcgacaagtcacgcctgacctggcggctgatgcgcctgttgcccagc
ctgctggacgccccagatactgctgaagcgttcactccattgaagcgctttctcgatacc
gacgatgaccagcgcaagcgccaccagttggccgagcgcctggcggacctgttcgaccag
tatcaggtctatcgcggtgactggctggaagcctggtccaatggcgatgatgtactgatc
gatgcacgaggccagtcccgcccactgccgcaagaccaacactggcaagcggtgctgtgg
cgagtgctgcgtgccgatattggcgaagccggtattgcctccagccgtgctggcgtccac
cagcgctttgtcgctgcctgccagtctctcgatgattcgacgcgtccagcagggctgcca
cgtcgaatcatggtatttggtatctcgtcgttgcccagccagaccctggaggccctggcc
gccctgtcgcggatgtgccaggtcgtgctgtgcgtgcataacccttgtgagttctactgg
gccgatatcatcgaacaccgcgatctgttgcgtgccgcccggcgtcgccagcagcagcgc
cccggcatgccactggatctcgacgacagccagatgcaccttcacgcccatcccttgctc
gcagcctggggcaagcagggccgcgattacctgcgcctgctcgatgagttcgatgaacac
cagcaatatgccaagctgttcgagaacgatgcactacgcatcgacctgtttgaaccacat
gccctgcccgatggccgccagcaactgttgcatcagttgcaggatgatattcgcgccctg
cgcccgctgagtgaaactcaatcactttggcccgcggttgaaaaagaaaaggatgtttca
ctgacattccatattgcgcacagcccattgcgcgaagtggaaatactccacgatcagttg
ctcgccgctttcagtgccgatgaaaccctcaggccacgagacgtgctggtgatggtaccg
gaggtggatgcctatgcagcggcagtgacatccgtgttcggacgtctggaaagcgacgac
ccacgctacattccctttaccctctccgaccaggccagccgccatcgccagccactggcc
atcgccgtggaaaccctgacccggctgccagagcttcgcctttcggtatcgaacctgctc
gacctgctcgaagtgccagccgtgcgagaacgctttgccatccgcgaggacgatctcccg
gtgctggaacgctggatcgcgggtagcggtatccgctggggactggatgccgagcagcgc
cagagcctcgacttgccaggagggttgagccagaacacctggacctttggcctgcgccgt
ctactgctgggctacgccgtgggagaaggggcagcagatgaaccgacaccagcgccagga
caggatacggcctggcacgatatcgcgccctacggtgacatcggcggactggaagccgcc
ttggctggcccgttggtgcgtctgatcgacaccctcgaacatcattggcatgcgctttcc
acaccgacggatgtaggcaactggtgcatccggctgcgcgcgctgctcgacgattgcctc
agcccggtggacgataacgacagcaacctgctcagccgtctcgatctagccttggaaacc
tggcatgaatcggctatcgaagcggacttcgatggcgagattcccctggcggtggtgcgc
gagcaatggctgacgaccctggacgacggcggtctgtcccagcgcttcctggccggtgcc
gtcaatgttgcgaccctgatgcccatgcgcgccattccgtttcgccatgtatggctgctg
ggcatgaacgatggcgactatccgcgtacccagattccccaggacttcgacctgatgggc
caggactatcggcccggggatcgttcgcgtcgggaggatgaccgctacctgtttctcgaa
gccctgctctccgcccgggagcgcctgtccatcagttgggtaggacgcagcattcatgac
aatagcgaatgtcccccatccgtactggtcagccagctgcgcgatcacctggcccggggc
tggcaactggacgagagcgatgaaaatggcagtaccgccctgctggagcacttgaccacc
gagcacccgctgacgcctttcagccctcactatttcatgggccagccacacctgttcagc
tatgcccacgagtggcgtcaggtgcatgatcgtgatgccctcacggaccaggtcattgct
cccctgccagcctgggaagccaacgcccccctgacactggctcgcctgtcccggttgctg
gacgaccccgtcgctacgttcttcaaccagcggcttggcgtccggctggccttgccggag
tctggccggctcgaccaggagccctttgccttgaatggcctggacagatggcagttgcaa
gacacgctgatccaggcccagcgcagggccgtcgacagtactgaaggcggtgaagacgac
aggcaccaggctcgtcaggatgccttgtacagcacactggatcggctggcccgggaaggt
catctcgccatggggggctttgccgaacgtatgcgtcagcacctggtcgagcccatggat
gaattgttcgagctatatgcccgaacctgccaacgctggccccatgcccatcaggtcgcc
accccggtttccctgacactgggaggtctggaaatcgaggatgtcatcgatgaacttcgc
caagacgctgatggccagcgctgtcgagtggtattgctgacatccagcttgattcgcaac
aaccgttaccactggaagcattgggtccgcccctgggtggtgcatctcgtggctcagatc
tgtctcggcccgaccaccacccgcctgctgtcccgcgtgggagatggccatctgccccca
ctgtccgccgatgaggcacagtcctggctcggcaacattgccaccgtctggcatcaagcg
atgtgtcgcccgctacccttggccagagattcggctttcgcctggctgcgcaaaggcgga
actcctgcagccatgtctcgtattctcgagggacagtctgaaaaagcggatgaagcggcc
ctggatgatgcctggaaagtcctggtaggcaatgaattccagcctggggaattccctcgc
aatgcttacctgacccgtgtctgggccggaccagaagccctgatcaatgagcatggcaat
gaatttgccgctctcgccgaatcgctatatgggccgctcagccgtcttgcgaggtccggg
gaagctgacaatggaggcaaccaatga
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