Halomonas binhaiensis: E4T21_18250
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Entry
E4T21_18250 CDS
T08791
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E4T21_18250
09124 Replication and repair
03420 Nucleotide excision repair
E4T21_18250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hbh03021
]
E4T21_18250
03036 Chromosome and associated proteins [BR:
hbh03036
]
E4T21_18250
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_18250
Enzymes [BR:
hbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
E4T21_18250
Transcription machinery [BR:
hbh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
E4T21_18250
Chromosome and associated proteins [BR:
hbh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
E4T21_18250
DNA repair and recombination proteins [BR:
hbh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
E4T21_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEM83275
UniProt:
A0A5C1NM96
LinkDB
All DBs
Position
complement(4204210..4206624)
Genome browser
AA seq
804 aa
AA seq
DB search
MTEPSAGFHQEPSAGFHQEPSAWCDQEPSAWCDQEPSVGVHQEPSAQRHVGVRTLCDFAA
RRGDLDHRFTPSPSAREGMDGHARVVASRGPGYRSEVAVSGVVCGIRVQGRIDGVDTAQG
NQEECLEEIKTHRGRLERMAVNQRALHWAQLRAYGALWCREHGHSRIHLALVYLDLVHGK
ETRFSDTVDAEVLWTELEALCRTWHAWGEAEAAHRQRRDKALEALGFPHFEFRPGQRHLA
EQVYKTGATGRTLLAQAPTGIGKTLGTLFPMLKAMPYQGLDRIAFLCMKTPGRGVALSAL
EQLGARSRIPLRVVELIARGKACEYPDKACHGESCPLAQGFYDRLPEARKAAAQHAWLDR
EGLRQIALKHEVCPYYLGQEMARWCDVAVGDVNHYFDASALLHGLCQMQGWRLGLLVDEA
HNLIDRARGMYSAGLDQKQLARLRKSAPKPLQRSLGSVMRRWQELIREQGGEDAGARDAP
LWRSLDQLPGDVISSLQHACAAISDYLGEYPDEVTPGLTEWMFDALAFTRLAESFAGHSL
CELVRMGRGDSRLGIANVIPADFLAPRFEVAHASVLFSATLAPASYQRDLLGLPGNAVWQ
EIDSPFAAEQLEVRVCRQLSTRFRDRKSSLPGVVATMAEQYRHCPGHYLAFFSSFAYLEQ
VRAALAEAYPDVPQRAQRRGMTEQEREGFLESFRPGESGIAFAVLGGAFAEGVDLPGERL
IGAFIATLGLPPNEPRQEALKECLEVRFGCGDDYAYRIPGLIKVVQAAGRVIRGPEDSGV
VVLMDDRYGRADIRSRLPRWWRPG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccatcagcgggttttcatcaagagccatcagcgggttttcatcaagagcca
tcagcttggtgtgatcaagagccatcagcttggtgtgatcaagagccatcagtgggggtt
catcaagagccttcagcgcaaagacacgtcggggtccgcaccctgtgcgatttcgctgcg
cgtcgcggcgacctggatcatcgtttcactccatctccttctgcccgggaaggcatggat
ggccatgcccgggtggtcgcttcgcgagggcccggttatcgctctgaagtggcggtgagc
ggtgtggtgtgcggcattcgtgtccaggggcgtatcgatggcgtggataccgcccagggc
aaccaggaggaatgcctggaggagatcaagacccatcgtggtcgcctggagcgcatggct
gtcaatcagcgagcattgcactgggcccagctgcgtgcctatggcgccttgtggtgccgg
gagcacgggcattcgcggatacatctggcgctggtctacctggacctggtgcatggcaag
gagactcgattttccgacacggttgatgccgaagtgctatggaccgagcttgaagcgcta
tgtcgcacttggcatgcctggggggaagccgaggcagcccatcgtcagcgccgggataag
gctctggaagccttgggctttccacactttgaattccgtcctggtcagcgccacctggcg
gagcaggtctacaagacgggagcgacaggccgaaccttgctggcgcaggcccctacaggt
attggcaagacgcttggcacgctgtttcccatgctcaaggccatgccctaccaagggctc
gatcgtatcgcgtttctgtgcatgaagaccccagggcgcggggtggcgctcagtgccctg
gaacaactgggggcgcgaagcaggattcccttgcgtgtggtcgagttgatcgccaggggc
aaggcctgcgagtatcccgacaaggcttgccatggtgaatcctgtcctctggcccagggc
ttttacgatcgcctgcccgaagcgcgcaaggcggcagcacaacatgcctggcttgatcgg
gaggggttgcgccagattgccttgaagcatgaggtgtgtccctattacctgggccaggaa
atggcgcgttggtgcgatgtggccgtgggggatgtgaatcactatttcgatgccagtgca
cttttgcacggactgtgtcagatgcagggatggcgcctgggtctgctggtcgatgaagcc
cacaacttgatcgatcgggccaggggcatgtattcggcagggttggaccagaagcaattg
gcacgcttgaggaagagcgctcccaagccacttcagcgttctctgggcagcgtgatgcgc
cgttggcaggaactgatccgtgaacagggaggcgaagacgcgggggcccgtgacgcgccg
ctatggcggtcactggatcagttgccgggtgacgtcatcagttccctgcaacacgcgtgt
gcagccatcagcgattaccttggagaatatcccgatgaagtcactcccgggctgacagaa
tggatgttcgatgcattggcattcacgcgcttggctgaaagttttgctggccattccttg
tgcgagctcgtccgtatggggcgaggcgactcacggcttggtattgccaatgtcattcct
gccgattttttagcaccacgttttgaggttgcccatgcctcggtgctgttttccgcgacc
ttggcaccagcgagctatcagcgagacctgctggggctaccgggaaatgcagtatggcag
gagatcgattctccttttgctgcagagcaactggaggtgcgggtgtgccgtcagctgtcg
acccgcttccgcgacagaaagtcatcattgccgggcgtagtggcgaccatggccgagcag
tatcggcactgtcctggccattatctggcattcttttccagcttcgcttatctggaacaa
gttcgggcagcactggcagaggcctatcctgatgttccccaacgtgctcaacgtcgggga
atgaccgagcaggaaagagaaggtttccttgagtcctttcgcccgggcgagtccggcatt
gctttcgccgtgttggggggcgctttcgctgaaggtgtcgatttgcctggtgagcggctg
attggcgcttttatcgccaccttgggattaccgcccaatgaaccacgccaggaggccctg
aaggagtgcctggaggtacgctttggctgtggcgatgattatgcctatcgcattcccggc
ttgatcaaggtggtccaggcggcaggtcgagtgatccgtggccccgaggatagcggcgtg
gtagtactgatggatgaccgctatggtcgtgcagacatacgttcacgattgccacgctgg
tggcgcccgggatag
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