Halomonas binhaiensis: E4T21_18470
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Entry
E4T21_18470 CDS
T08791
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03410
Base excision repair
hbh03430
Mismatch repair
hbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E4T21_18470
03430 Mismatch repair
E4T21_18470
03440 Homologous recombination
E4T21_18470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_18470
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
E4T21_18470
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E4T21_18470
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E4T21_18470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
GGDEF_2
NNH3
Motif
Other DBs
NCBI-ProteinID:
QEM83319
UniProt:
A0A5C1NND3
LinkDB
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Position
complement(4252598..4254397)
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AA seq
599 aa
AA seq
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MSSLPVAGNEALPRPLILARPFNEAFHQRAMAAGLTELQARILVGRLRDYTGDIEALVDP
GLRHLAHPGRLADGSRAAERIAQAVAEGEHIGILTDYDVDGITSHVVIRRTLNELFGVPR
QRLHSLIGHRIHDGYGISMPLVERTLKLSPRPTLVITADCGSSDEPRIARLKQAGIDVVV
SDHHALPIEGPPPSAYATVNPTRSDCDYPDATIAGCMVAWLVMSLARATLIEQGVLEADT
PKLSPWLSYVALGTVADCVSLGGSAINRAVVRHGLTLINRMNEPCWRAMAERLGADSIPF
NAETLGFQMGPRINARSRLDDPYAALHFMLAGSDDVAHRHLAVLDDDNQARKAIEADMVE
DAKVLAKSALLEDAPAIVVYLEDGHPGVQGIVASRLVQAYGRPTLVLTPAAEAGMLTGSG
RSIEQLHLRDALQRTHELAPETLPRFGGHRGAAGVGVPLSCLADFRRAFLQAAGEQLEGI
ELAPRIYTDGELSIAQLDLATLDEIEALGPYGREFESPLFEGEFIVERLRPVGDGSHLMM
ELSLGRMSWKAIWFRALVPGELPSFSEGATLRCAYKLNRNRYRGRESLQLMIEHGEAKG
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctttgccagtcgcggggaatgaggccttgccgcgtcccttgattcttgctcgt
ccattcaacgaagcattccatcagcgtgctatggcggcagggttgacggagctgcaggct
cggatactggtaggccgcttgcgtgactataccggtgacattgaggccttggtggatcct
ggtttgcgccatctggcacaccctgggcggctggcggatggctctcgggcggccgagcgc
attgctcaggcggtagcggaaggtgagcatattggaattctcaccgactacgacgtggac
ggcatcacctcccatgtggtgattcggcgtacgctcaatgaactattcggagtgcctcgg
cagcgcctgcatagcttgatcggccatcgtatccatgatggttatggcatcagcatgccg
ctggtagaacgtactctgaagctttctccacgccccaccctggtcatcactgccgactgt
ggctcatccgatgaacctcgtatcgctcggctcaagcaggccgggatcgatgttgtggtc
agtgatcatcatgcgctgcccatcgaaggcccaccgccttctgcatatgcgaccgtcaat
ccaacccgcagtgactgcgattatccggatgccacgattgctggttgcatggtggcctgg
ttggtgatgtcgctggctcgggcaaccctgatcgagcaaggggtgctggaggcggatacg
cccaagctttctccctggctgtcctatgtggcccttggtacggtggccgactgtgtctcc
ctggggggcagtgccatcaaccgggctgtcgtgcgtcatggcctgacgttgatcaaccgc
atgaatgagccctgctggcgagccatggctgagcggctgggagcggatagtatccctttc
aatgcagagacgctgggtttccagatgggccctcgcatcaacgctcgttctcgcctggat
gatccctatgccgcgttgcacttcatgctggcaggcagtgatgatgtcgctcacaggcat
ttggctgtattggatgatgacaatcaggcgcgcaaggccatcgaggctgatatggtcgaa
gacgccaaggtcctggcgaaatctgcattgctcgaggatgctccggctatcgtggtatat
ctggaagatggacatcctggtgtgcagggtattgtggcctcgcgcctggtgcaggcctat
ggacggcctacactggttctgacccccgctgccgaggccggtatgctgacaggttctggc
cgttcgatagagcagcttcatctgcgcgatgccttgcagcgtacccatgaactagcgcca
gagacactgccgcgctttggcgggcatcgtggcgctgcgggcgtcggagttcccttgtct
tgcctcgccgatttccgcagggcctttctccaggcagccggggagcaactggagggtatt
gaactggctcccaggatatataccgatggcgagctgagcatcgctcagctggatcttgcc
accctggatgaaatcgaagctctgggtccctatgggagggaattcgaatctcccttgttc
gaaggcgagtttatcgtcgaacgactgcggccagtgggagatggcagccatttgatgatg
gaattgtccctggggcgtatgagctggaaggccatctggttccgtgctcttgtacctggc
gagctgccttccttctcggaaggtgccaccctgcgttgtgcctacaagctcaatcgcaat
cgataccgtggacgtgagtccctgcaactgatgatcgaacatggcgaggccaagggctga
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