Halomonas binhaiensis: E4T21_18965
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Entry
E4T21_18965 CDS
T08791
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hbh
Halomonas binhaiensis
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbh03016
]
E4T21_18965 (truB)
Enzymes [BR:
hbh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E4T21_18965 (truB)
Transfer RNA biogenesis [BR:
hbh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4T21_18965 (truB)
Prokaryotic type
E4T21_18965 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QEM83405
UniProt:
A0A5C1NMK6
LinkDB
All DBs
Position
complement(4368786..4369742)
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AA seq
318 aa
AA seq
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MARRRRGLPIDGVLLLDKPKGMSSNYALQRARRLFQAQKAGHTGTLDPMATGLLPVLFGE
ATKFSQHLLEADKVYRTRVELGTSTDTGDAEGEVIACRPVPALEESDVASMVAGFIGEQD
QLPPMYSALKHQGRKLYELAREGKSVERASRRIKVYDARLLCVSLAGESPCFDLEVRVSK
GTYVRVLAEDMARALGCEGHISQLRRLKSGPFDASGMQDFEALEALPDQAALEAQLMPVD
CLLGHLAAHRLSESGAKAMRYGQIARGELAPEMPGTADRALIRLYHGETFVGLGGVESSG
DVVPRRLLSSFVAGSGQT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtcgcggcttgccaattgatggtgtgttgttgctggacaagcccaag
ggcatgtccagcaattatgcactgcagcgggcacgtcgcctgtttcaggcccagaaagcc
gggcataccggtactctggacccgatggctaccgggttgctgccagtgttgtttggcgaa
gccaccaagttctcacagcacctgctggaagcggataaggtctaccggacccgagtcgaa
ttggggacgagtaccgataccggcgatgctgagggcgaggtgattgcttgtcgtccggta
ccagcgctggaagaaagtgatgtggcatccatggtggctggattcattggcgagcaggat
cagttgccgccaatgtattcggcactgaagcatcaggggcgcaagctgtatgaattggcc
cgtgaaggcaagagcgtcgagcgtgcaagccggcgtataaaggtgtatgatgcgcggctg
ctttgcgtatccttggctggagaaagcccctgtttcgacctggaagtcagagtcagcaag
gggacttatgtgcgtgtcctggccgaggatatggctcgggctttaggctgtgaaggccat
atctcgcagctgcgccgattgaagagtggccccttcgacgccagcggtatgcaggatttc
gaagcgctggaagcactgcctgatcaagcggctttggaagcacaattgatgccggtcgac
tgcttgctcggacatcttgctgctcatcggttgagcgaatctggcgccaaggccatgcgc
tatggtcagattgcgcgtggtgagcttgcaccggagatgcctggcactgccgaccgtgca
ctgattcgtctctatcacggtgagaccttcgtgggtcttggtggggtagagtcgtccggg
gacgtcgttccccggcgccttttgagttcgtttgtagcgggctctgggcaaacctga
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