Halomonas binhaiensis: E4T21_19815
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Entry
E4T21_19815 CDS
T08791
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4T21_19815 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hbh03019
]
E4T21_19815 (pcnB)
Enzymes [BR:
hbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
E4T21_19815 (pcnB)
Messenger RNA biogenesis [BR:
hbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E4T21_19815 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEM83555
UniProt:
A0A5C1NN33
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All DBs
Position
4554892..4556301
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AA seq
469 aa
AA seq
DB search
MIKGFARFLQSPGERLRSLFGASEAAGGPSTPRVIPRDEHPVSRRQFSEAALKVLYRLHN
AGFEAFLVGGCLRDSLLGLNPKDFDVATDATPEEVKQLFRNSRIIGRRFRIVHVRFGREV
IEVTTFRGKPNDDHGEHLASQSDAGLLLRDNVWGNIEEDALRRDFTVNALYYSIADFSIH
DFAGGLSDIESRTLRLIGDPATRYREDPVRMLRAMRFAAKLDFHMAPETEAPIREMAPLL
LQIPPARLFDEVLKLFLSGEGLKTFRLLREYHLFAMLFPEADECINEHHWAEVLIEQALG
STDRRIRDDRPVTPAFLLAAFMWGPVQIRQAQLEADGMPPVPALQTAAQQVISRELQHVS
IPKRFSMPMRDIWDLQQRLPQRRGKRAFQTREHPRFRAAYDFLLLRETSGEMPPGLGAWW
TAFQEADEHEQRRLLHSVGTDPASSPTRPRKRRRRRRPRSNTSNSPSES
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaggatttgcccgctttttgcaaagtccaggagagcgcctgcgctccctgttc
ggcgcctcggaggccgccggaggcccatcaacacctcgcgtcattcctcgcgatgagcac
ccagtgtcccgccgtcagttcagcgaagcggccctcaaggtgttgtatcgcctgcataat
gccggctttgaggcctttctggttggtggctgcctgcgcgattccctgctgggtctgaat
cccaaggatttcgacgttgccaccgatgccactccggaagaggtcaagcagctgttccgc
aactctcggatcattggccgccgtttccgtatcgttcacgtgcgtttcggccgcgaagtc
attgaggtaacaaccttccgtggcaagcccaatgacgatcacggcgaacatctcgcttcc
caatccgatgcaggcctcctcttgcgtgacaatgtgtggggcaatatcgaagaggatgcg
ctacgtcgcgacttcaccgtcaatgccctttactacagcatcgcagacttctctatccac
gattttgcaggtggcctgtctgatatcgagtcacgcactctgcgcttgatcggcgatcca
gcgacccgctatcgcgaagaccccgtacgcatgctgcgagccatgcgtttcgccgccaag
ctcgactttcacatggcgcctgaaaccgaggctcccattcgtgaaatggcgccactgctg
ctgcaaatcccccctgcgcgcctgtttgatgaagtactcaagctgtttctttctggtgaa
ggcctgaagactttccgcttgctgcgcgaataccacttgttcgccatgctgttcccggaa
gccgatgagtgcatcaatgagcatcactgggccgaagtactgatcgagcaagcacttgga
agtaccgatcgacgtattcgcgatgatcgaccggtgactcctgcattcctgttggcggcc
ttcatgtgggggccggtccagatccgtcaggcacagctcgaagccgacggaatgcctccg
gtgccagcgctccagacagcagcccagcaggttatcagccgcgagttgcaacacgtgtcc
attcccaagcgattcagcatgccgatgcgggatatctgggacttgcagcagcgcttgccc
cagcgtcgcggcaagcgtgccttccagacacgagagcacccgcgtttccgtgctgcttat
gactttttgctgctacgagagacctcaggggaaatgcctccagggctgggcgcttggtgg
acggccttccaggaagcagatgaacacgaacaacggcgcctgttgcatagtgtcggcaca
gatccagccagcagcccgactcgtccgcgcaagcgccgccgccggcgccgtcctcgttcc
aatacttccaactcgccatcagaatcatga
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