Halomonas binhaiensis: E4T21_20345
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Entry
E4T21_20345 CDS
T08791
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh00541
Biosynthesis of various nucleotide sugars
hbh01100
Metabolic pathways
hbh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E4T21_20345 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hbh01005
]
E4T21_20345 (rfaD)
Enzymes [BR:
hbh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
E4T21_20345 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hbh01005
]
Core region
E4T21_20345 (rfaD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
QEM83649
UniProt:
A0A5C1NP67
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All DBs
Position
complement(4671902..4672858)
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AA seq
318 aa
AA seq
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MIVVTGGAGFIGSNLVKALNERGRTDVLVVDDLSDGTKFINLADLTLGDYMDKDEFLARV
KAHMRGELNQLPPIEAIFHEGACSDTTEWDGKFMLENNFTYSKELLHFCEQEGIPFLYAS
SAATYGGSEVFVESPEHEKPLNVYGYSKLLFDQYVRSLEGKLTTQVAGFRYFNVYGPREQ
HKGKMASVAFHNHTQVRAGDNLRLFGAYDGYEAGMQSRDFVYVGDVVKVNLWFLDNPQAR
GIYNLGTGRAEPFKAIGEAVIDYYGKGKIDYIDFPDELKGRYQSYTRADISRLREVGYDE
EFRTVAQGVREYLEWLNA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtagttacaggcggagccggcttcatcggctcgaatctggtcaaggcgctcaat
gagcgtggccgtaccgatgtgctggtggtggatgatctgagtgatggcaccaagttcatc
aacctggctgatctgacgctgggcgattacatggacaaggatgagttcctggcccgggtc
aaggcccacatgcgaggtgaactcaatcaactgccgcccatcgaagcgatcttccatgaa
ggcgcctgctcggatacgaccgagtgggatggcaagttcatgctcgagaacaacttcacc
tattccaaggagctgttgcacttctgcgagcaggaaggcattccattcctgtatgcgtca
tcggcagcgacctatggcggtagtgaagtgttcgtcgaatctcccgagcatgagaagccg
ctcaatgtctacggctattccaagctgctgttcgaccagtatgtgcgctctctggagggc
aagctgacgactcaggtggcggggttccgttacttcaacgtctatggcccgcgtgagcag
cacaagggcaagatggccagtgtggccttccataaccatactcaggtgcgggcaggtgac
aatctgcgcctgttcggcgcttacgatggttatgaagcgggcatgcagagccgtgacttc
gtctatgtgggagacgtcgtcaaggtcaacctgtggttcctcgacaacccccaggctcgc
ggcatctataatctgggaactggccgtgccgagccgttcaaggccattggcgaggctgtg
atcgactattacggcaaaggcaagatcgactacatcgacttccccgatgaactcaaaggg
cgttatcagagctacacccgtgcggatatttcccgcctgcgtgaagtcggctacgacgag
gagttccgcaccgtggcccaaggggtgcgagagtacctggagtggttgaatgcctga
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