Halomonas binhaiensis: E4T21_20655
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Entry
E4T21_20655 CDS
T08791
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hbh
Halomonas binhaiensis
Pathway
hbh03420
Nucleotide excision repair
hbh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E4T21_20655 (uvrD)
03430 Mismatch repair
E4T21_20655 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbh03400
]
E4T21_20655 (uvrD)
Enzymes [BR:
hbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E4T21_20655 (uvrD)
DNA repair and recombination proteins [BR:
hbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E4T21_20655 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
E4T21_20655 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
T2SSE
DEAD
Motif
Other DBs
NCBI-ProteinID:
QEM83709
UniProt:
A0A5C1NPI3
LinkDB
All DBs
Position
4739398..4741599
Genome browser
AA seq
733 aa
AA seq
DB search
MDDLAILDALNPAQCEAVKAPQGNMLVLAGAGSGKTRVLVHRIAWLMQVEGLSPYAVLAV
TFTNKAAREMRTRLEALLNISLRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQL
RLVKRLLKDNSIDDERYPPRQVQSFISGCKEEGLRPHQVRTHGDAYVETMVSLYDIYQLT
CERGGLVDFGELLLRSLELLRDNPALLAHYQERFAHVLVDEFQDTNTLQYAWLKLLTGQK
TPMTVVGDDDQSIYGWRGARVENIRRFEDEFPNTKVVRLEQNYRSTSAILDAANALIRQN
TDRLGKELWTEGEHGEPISVYAGFNDMEEARFIVDTIKEKVDEGFLRRDIAILYRSNAQS
RVIEETLIRQGMPYRIYGGQRFYERLEIKNALAYLRLLLNRDDDASLERVINVPARGIGT
RTVEVLRERARHSEVSLWQALHDALSDGMLKGRAGNAVKAFADLIESLDNETSGLPLHEI
IEHVNEHSGLIEHHRSEKGEKGQARVENLEELINAARAFTQGESLETIEAGEGMAALEAF
LAEAALNAGEHEADEFEDCVQLMTLHSAKGLEFPVVFIAGVEEGLFPHRMSIEEDGRLEE
ERRLCYVGVTRAMRKLYLTHAEIRRMHGKETFQRPSRFLREIPDSLLEEVRLRGQISRPV
SSRPQPARWRQTEVAASDNHPALSLGQRVMHPVFGEGVILNAEGEGERARVHVSFEGVGD
KWLVLGFAKLTPL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttggcgattcttgatgcgctcaacccagcccagtgcgaggcggtcaaagct
ccccagggcaatatgctggtgttggctggtgccggctccggcaagactcgggtgctggtg
catcgtatcgcctggttgatgcaggtcgagggtctttctccttacgccgtactggcagtg
acctttaccaacaaggcagcccgggaaatgcgtacacgcctggaggcgttgctcaatatt
tccctgcgccatgtctgggtaggcacttttcactccattgcccaccgcctgttgcgtacc
cactggcaagatgcccgcctgccccagcactttcaaatcatcgacagtgatgatcagctc
aggctggtcaagcgtctgctcaaggacaacagcatcgatgatgaacgctatccaccgcgc
caggtgcagtcgttcatctccggatgcaaggaagaaggcctgcgcccacatcaggtgcgc
acccatggcgatgcctatgtagaaaccatggtgtcgctgtacgacatctatcaattgacc
tgtgaacgtggcggtctggtggatttcggtgagctattgctgcgcagtctggagctgtta
cgcgacaatcctgcgttgttggcgcattatcaggaacgctttgcccatgtactggtcgac
gagttccaggacaccaatacgctgcaatatgcctggttgaagcttttgaccgggcagaag
acgccgatgacggttgtcggtgacgacgaccagtcgatctatggctggcgtggcgccagg
gtggagaatatccggcgtttcgaagatgagtttcccaataccaaggtggtgcgcctggaa
cagaattatcgttccaccagtgccatcctcgatgccgccaatgcgttgattcgccagaat
acggatcgactaggcaaggagctgtggaccgagggtgagcatggcgagcccatctccgta
tatgctggcttcaacgacatggaagaagcacgtttcatcgttgatacgatcaaggagaag
gtggatgaaggcttcctgcgtcgtgatatagccatactctaccgttccaatgcgcagtct
cgtgtcatcgaagaaaccttgatccggcagggcatgccctatcgtatctatggtggtcaa
cgcttttacgaacgcctggaaatcaagaatgccctcgcgtatctgcgcctgctgctcaac
cgtgatgacgatgcttccctggaacgagtgatcaatgtgccggcgcgcgggattggcacc
cgtaccgtggaagtcttgcgtgagcgtgcccggcatagtgaggtgtcattatggcaggcg
cttcatgatgccttgtcagatggaatgctgaaggggcgggcaggcaatgcagtcaaagcc
tttgccgacctgatcgagagcctggacaacgagacgtctggcctgccgcttcacgaaatt
atcgagcacgtcaatgaacactcgggactcatcgaacatcatcgcagtgaaaagggcgaa
aaaggccaggctcgggtagagaacctggaagaattgatcaacgcagctcgtgctttcacc
caaggggagagtctggagaccattgaagcgggtgagggcatggcagccctggaagctttc
ctggccgaggcagcgctcaatgcgggcgagcatgaggcagatgagttcgaggactgtgtg
cagcttatgacgctgcattctgccaaggggctggagtttccggtggtcttcattgctggt
gtcgaggaagggcttttcccgcaccggatgtccatcgaagaggatggaagactcgaggaa
gagcgtcgtctgtgttacgtcggcgtgactcgggccatgcgcaagctctatcttacccat
gcagaaattcgtcgcatgcatggcaaggaaaccttccagcgtccttcacgtttcctgcgg
gaaattcctgactccttgcttgaggaagtgcgcttgcgtggtcagatctcgcggcctgtc
agttcccgtcctcaacctgctcgctggcgccagaccgaagtggctgccagcgacaatcat
cctgcactgtccctgggccaacgtgtgatgcaccccgtctttggtgaaggtgtcattctc
aatgctgaaggagaaggtgagcgtgccagagttcatgtcagcttcgaaggtgtcggagac
aaatggctggtactggggttcgccaaactgacaccgctatga
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