Helicobacter bizzozeronii: HBZC1_00260
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Entry
HBZC1_00260 CDS
T01540
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hbi
Helicobacter bizzozeronii
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hbi03016
]
HBZC1_00260
Enzymes [BR:
hbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HBZC1_00260
Transfer RNA biogenesis [BR:
hbi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HBZC1_00260
Prokaryotic type
HBZC1_00260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CCB79012
UniProt:
F8KQK8
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All DBs
Position
25076..25720
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AA seq
214 aa
AA seq
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MNASRFFASGHAPITFSFHKCPRDFVVQEEPLYAFYGHGDHLIVQVRKKNKSTWEMLSLL
SQVLGCDVSIFGYAGLKDKHTMALQYVSMPKSYETLLDQHTPILAEQGITILRSTTHPHK
LNLGHLKGNHFLVRLKKLDPINAQRISQVLLFLQAYGFPNYLGVQCSESLEEGFKHGNAS
SKKIDRVLLSNQQSCLFNQCVGCAHALKFPCAGS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgtctagattttttgccagtggccatgcccccatcacattttctttccacaaa
tgccccagagactttgtggtgcaagaagaacccttgtatgctttctatgggcatggggat
catctcattgtgcaggtgcgtaaaaagaacaagagcacttgggagatgctttcgctatta
tcgcaagtattgggttgtgatgtatccatttttggttatgctggactcaaggacaaacac
acgatggcgttgcaatatgtgtccatgcccaaaagctacgaaactctattggaccagcac
acccccatacttgccgagcaaggaatcacgattctaaggagcaccacgcacccccataaa
ctgaatctagggcatctcaagggcaatcactttttagtgcgccttaaaaaactcgatccg
atcaatgcccaaagaatcagtcaggttttgctttttttacaagcctatggtttccccaac
taccttggggtgcaatgctctgagagcttggaagaaggttttaaacacggcaatgccagt
agtaaaaaaatcgatcgggtcttgctttctaaccaacaaagttgtttgtttaaccagtgt
gttgggtgcgcgcatgcacttaaatttccttgtgcaggttcttag
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