Helicobacter bizzozeronii: HBZC1_01220
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Entry
HBZC1_01220 CDS
T01540
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hbi
Helicobacter bizzozeronii
Pathway
hbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBZC1_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbi03400
]
HBZC1_01220
Enzymes [BR:
hbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HBZC1_01220
DNA repair and recombination proteins [BR:
hbi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBZC1_01220
Prokaryotic type
HBZC1_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CCB79108
UniProt:
F8KQV4
LinkDB
All DBs
Position
117132..117878
Genome browser
AA seq
248 aa
AA seq
DB search
MLFHILERLKKSAWHGLLMPIAGTLEFKTLNQNYMQSLRSAQIKRTRVFPLPTELFKAFE
YTPLECLHTILLGQDPYPGTFMHQGQEYPLAMGLSFSVPKAAPIPKSLQNIYKELSLSLN
IAPSPHGNLQAWATQGVLLLNAILSVEKNRPKSHESLGWESFTNQVLRQLSTLQRPLVFM
FLGRVAQEKIKLLSPNPQHLILSAPHPSPLAQSRPPLFLGSGVFYKAQEFLQAQNIPMDW
ALDPLPRD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgctcttccatatcttggagcgtctcaaaaagagtgcatggcatggtttgctcatgccc
attgcgggcactttagagtttaaaacgctcaatcaaaactacatgcaaagtcttaggagc
gcacaaataaaacgcacgcgggtttttcccttgccaaccgagcttttcaaggcgttcgaa
tacacccccctagagtgtttgcacaccatccttttaggtcaagacccctacccggggact
tttatgcaccaaggtcaagaataccctttggctatgggtttgagctttagcgtgcccaaa
gccgcccccatccctaagagtttgcaaaatatttacaaggaattatctttaagtctaaac
atcgcccccagcccccatggcaatctgcaagcttgggcaacacaaggtgttttactgctc
aatgcgattttaagcgtggaaaaaaatagacccaagtctcatgaatctttaggctgggag
agtttcaccaaccaagttttaaggcaactttccaccttgcaacgccccctagtttttatg
ttcttgggtagagtggcgcaagaaaaaatcaagcttttaagccccaatccccaacatttg
atcttatctgctccccacccaagcccgcttgcccaaagtcgcccccctttgttcttaggc
agtggggttttttacaaggctcaagagtttttgcaagcccaaaatatcccgatggattgg
gcactagaccccttaccacgagactga
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