Helicobacter bizzozeronii: HBZC1_03990
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Entry
HBZC1_03990 CDS
T01540
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
hbi
Helicobacter bizzozeronii
Pathway
hbi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBZC1_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hbi03400
]
HBZC1_03990
DNA repair and recombination proteins [BR:
hbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBZC1_03990
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HBZC1_03990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
ResIII
Helicase_C
DEAD
AAA_22
AAA_30
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
CCB79385
UniProt:
F8KRJ8
LinkDB
All DBs
Position
367984..369528
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AA seq
514 aa
AA seq
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MSPFNLHAPYAMSLEQQKVVQTLSKGVEQGARYQTLIGVTGSGKTFSMANLIVRLQMPTL
IMSHNKTLCAQLYSEFKGFFPKNHVEYFISHFDYYQPESYIPRRDLFIEKDSSINEDLER
LRLSAVTSLLSYEDVIVVASVSANYGLGNPAEYLSMLEKIQVGQVRPYKKFLLKLIEMGY
CRQEILERGKFRVVGECVDIFPAYNDENFIRIEFFGDEIERITSMDALENTPLKQLDSYP
LYAANAFIVSPERLQQAIKDIEQELQARLSFFKQAQKPLEYERLKTRTEFDLEMISATGI
CKGIENYARHFTGKQEGETPYTLMDYFAQKQRPFLVIVDESHVSLPQFKGMYAGDLSRKQ
VLVDYGFRLPCALDNRPLQYEEFITKPPHFLFVSATPNPLELELSQGHIAQQIIRPTGLL
DPEYEVRPVANQVRDLFESIKEVVSRHERVLVTTLTKRMAEELCKHYLEWGLRVQYLHSD
IDAIERNHLIRELRLGVFDVLIGINLLREGLAFA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagtccattcaatctacacgctccctatgccatgagtttggagcaacaaaaggtcgtg
caaactttgagtaagggggtagagcaaggggcgcgttaccaaactttgatcggagttaca
ggtagtggcaagacctttagcatggcgaatttgatcgtgcgcttgcaaatgcctacattg
attatgagtcataataaaaccctctgcgcccagctttatagcgagttcaaaggctttttc
cccaaaaaccatgtggaatactttatctcccactttgattactaccagcccgaatcttat
atccccagacgcgatcttttcatagaaaaggacagctcaatcaatgaagatttagaacgc
ctgcgcttgagtgcggtaacttcattgctgagttatgaggatgtgattgtggtcgctagc
gtgtcggctaattatgggctgggtaaccctgctgagtatttgagcatgctagaaaaaatc
caagtagggcaagtgcgcccttataagaaattcttactcaaactaatagaaatgggctat
tgccgccaagaaatcttagagcggggtaaatttagggtagtgggggagtgtgtggatatt
ttccccgcttataatgatgaaaactttatccgtatcgagttttttggcgatgagatcgag
cgcatcactagcatggacgcgctagagaacactcccttaaagcaactagactcttacccc
ctctatgcagcaaatgcctttattgtgagcccggagcgtttgcaacaagctattaaagac
attgagcaagagttgcaagcccgtctaagctttttcaaacaagcccaaaagcccctagag
tatgagcgccttaaaacccgcaccgaatttgatttagagatgattagtgccacgggcatt
tgtaagggcattgaaaattacgcgcgccactttacgggcaaacaagagggggagactccc
tatactttgatggattacttcgcccaaaagcaacgcccctttttggtgatagtcgacgag
tcgcatgtgagtttgccccaatttaagggcatgtacgccggggatttgagccgtaagcaa
gtcttggtagattatggctttagattgccttgcgcgctggataatcgcccgctccaatat
gaagagtttatcaccaaacccccccattttctctttgtctcagctacccctaacccccta
gagttagaactctcacaagggcatatcgcccagcagattatccgccccaccgggttatta
gaccccgaatacgaagtgcgccccgtggctaaccaagtgcgggatttatttgagagcatt
aaagaggtggtgagcagacatgagcgtgtgctggttactaccttgactaagcgcatggca
gaggagttatgcaagcactatttagaatggggcttgagggtgcagtatctgcatagcgat
attgatgcgatcgagcgtaaccacttgattagagagcttagattaggggtttttgatgtg
ctcattgggatcaacttgttaagagaggggctagcatttgcctga
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integrated database retrieval system
