Helicobacter bizzozeronii: HBZC1_04330
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Entry
HBZC1_04330 CDS
T01540
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hbi
Helicobacter bizzozeronii
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbi03032
]
HBZC1_04330
03400 DNA repair and recombination proteins [BR:
hbi03400
]
HBZC1_04330
Enzymes [BR:
hbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HBZC1_04330
DNA replication proteins [BR:
hbi03032
]
Prokaryotic type
DNA Topoisomerases
HBZC1_04330
DNA repair and recombination proteins [BR:
hbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HBZC1_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_C_rpt
Zn_ribbon_3
DNA_ligase_ZBD
Cas12f1-like_TNB
O-FucT
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CCB79419
UniProt:
F8KRN2
LinkDB
All DBs
Position
complement(400927..403233)
Genome browser
AA seq
768 aa
AA seq
DB search
MKANPKKLIIVESPTKAKTIANFLDQNYQVIASKGHVRDLSKYAMGIRIQEDKFIPKYIV
DKDHEDIVEQILSLAKSASQIYIATDEDREGEAIGYHIAYLIKENQRTSQTKKMSANQIL
QETLDLEQQTNHAPSSNPIFHFPRIVFHEITKSAILHALKHPKTLDVYKINAQLARRLLD
RIVGFSLSSLLASKIAKGMSAGRVQSAALKIVVDREREIQAFKPLIYYNIEGIFEGCIEA
SLESYLGEKIKKQSLTDAPDALKMVAHLRAQTYQVQEITHKNKTSPSPPPFMTSTLQQSA
STHLGYGPSKTMGIAQRLYEGVATPEGMSGVITYMRTDSLNVAKEAIKAARDFISTTYGA
PYLPNKPKTYTAKNKAAQEAHEAIRPTNLNFTPTIAKDYLKPEEYRLYTLIYNRFLASQM
TDALFENQTLRLSCADGTFKASGRKLIFDGYHRVLGECDRDKLLPALQKDQSVRLDKLEA
KKCSTEPPTRYSEASLIKTLESLGIGRPSTYAPTIALLANRSYVKLENKQLVPTEDAFVV
IGILEKHFSEIVDAAFSAGLEDKLDAIASSKASWQQVLFDFYTPFMDKIEAGKAQIASQK
SSVPTGEFCPECGLELVQRKGRFGEFVACSGYPKCKFVKPPSEQTPTPLEPCEKCGKPMV
LKKGRFGEFVACSGYPQCKNIRSKAPQLKEEKVAGVCPECGGHVVEKRGRRGLFYGCANY
PQCQFISNYPPSDQKCPECGYVLVFKAYKRKPSVWACLKCAFTRLADV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaacccaaaaaagcttatcattgtggaatcgcccacaaaagccaagaccatt
gccaattttctcgatcaaaattaccaagtcattgcctctaaagggcatgtgcgggatttg
agtaaatacgccatggggattcgcatccaagaggataagtttatccccaaatacattgtg
gataaagaccatgaggacattgtggaacaaattttaagcctcgccaagagtgctagccaa
atttacatcgccaccgatgaggatcgcgagggggaagccattggttaccacattgcctat
cttatcaaggaaaaccaacgcacctcacagacaaaaaagatgagtgctaatcagatcttg
caagaaaccctagatttggaacaacaaaccaaccacgccccctccagtaatcccattttc
cacttcccccgcattgtcttccatgagatcaccaaatccgccattttgcatgccctcaaa
caccccaagacccttgatgtctataaaatcaacgcccaattagcgaggcgtttgctcgat
cgcattgtgggctttagtttgagctctttactggctagcaaaattgctaagggcatgagt
gctgggcgggtgcaaagtgccgcgcttaaaatcgtggtggatcgcgaaagggagattcag
gctttcaagcccttaatttattataacattgagggcatctttgagggttgcattgaggca
agcttggagagttacttgggggagaaaatcaaaaaacaaagtcttacagatgcacccgat
gcgctcaaaatggtcgcacacctgcgcgcccagacctaccaagtccaagagatcacccat
aaaaataaaaccagcccctccccacccccctttatgacctccaccttgcaacaaagtgcc
tcgacccatctaggctatggtccctctaagactatgggtatcgcccaaagactctatgag
ggcgtggcgactcctgaggggatgagcggggttatcacctatatgcgtactgatagcctg
aatgtcgccaaagaagcgatcaaggcagcccgggattttattagcaccacttatggcgcg
ccctatttgcctaataaacccaaaacctacaccgccaaaaacaaagccgcccaagaagcc
catgaagccatccgcccgaccaatctaaacttcacacccaccatcgctaaggattatctc
aagcctgaggaataccgactttataccttgatctataaccgctttttggcttcccaaatg
accgatgccctctttgaaaaccaaactctgcgcttaagttgtgcggatggcactttcaaa
gccagcgggcgcaaattgatttttgatggctaccatcgggttttaggcgagtgcgatcgc
gataaacttttacctgccctgcaaaaagatcagagtgtgcgtttagataagctagaggct
aaaaaatgctccacagagccccccacgcgttattctgaggcctctttgatcaagacccta
gagagtttgggcattgggcggcccagcacttatgcgcccaccattgccctactggctaat
cgttcctatgtcaagttagaaaataaacaactcgtgcctacagaagatgcctttgtggtg
attgggattttagaaaaacattttagtgagattgtggatgcggcttttagcgcagggcta
gaggataaattagatgccattgctagtagcaaagcctcatggcaacaagtgctctttgat
ttttacaccccctttatggacaaaattgaggcaggaaaagcccaaattgcctcccaaaaa
agcagcgtgccaactggggaattttgcccggagtgtggtttagaattggtccaacgcaag
ggcagatttggggagtttgtggcatgcagtgggtatcctaaatgcaaatttgtcaaaccc
cccagcgagcaaaccccaacccccctagaaccatgcgagaaatgcgggaaacccatggtg
cttaaaaaaggcagatttggggagtttgtggcatgcagtgggtatccacaatgcaaaaat
atccgctccaaagccccccagctcaaagaagaaaaagtggctggtgtgtgccctgagtgt
ggcgggcatgttgtggaaaaaagaggcaggcgggggttgttctatgggtgtgctaattac
ccccaatgccaattcatttccaattacccgcccagcgatcaaaaatgccccgagtgtggg
tatgtgctggtgtttaaagcctataagaggaaacctagcgtgtgggcgtgcttgaagtgc
gcttttacaaggttggctgatgtctaa
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integrated database retrieval system
