Helicobacter bizzozeronii: HBZC1_08440
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Entry
HBZC1_08440 CDS
T01540
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hbi
Helicobacter bizzozeronii
Brite
KEGG Orthology (KO) [BR:
hbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hbi03032
]
HBZC1_08440
03400 DNA repair and recombination proteins [BR:
hbi03400
]
HBZC1_08440
Enzymes [BR:
hbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HBZC1_08440
DNA replication proteins [BR:
hbi03032
]
Prokaryotic type
DNA Topoisomerases
HBZC1_08440
DNA repair and recombination proteins [BR:
hbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HBZC1_08440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF1664
PMI_typeI_hel
Motif
Other DBs
NCBI-ProteinID:
CCB79830
UniProt:
F8KSQ1
LinkDB
All DBs
Position
complement(796826..799240)
Genome browser
AA seq
804 aa
AA seq
DB search
MEIKDVKIEESLQESYLDYSMSVIVGRALPDARDGLKPVHRRILYAMHELGLGSKVGYKK
SARIVGDVIGKYHPHGDSAVYEALVRMAQDFSMRLPLVDGQGNFGSIDGDNAAAMRYTEA
RMAAPSEELLRDIEKDTVDFNDNYDSTLKEPDILPSRLPNLLINGSSGIAVGMATSIPPH
RPSEIIDALVLVLDNPQIDLLSILEVIQGPDFPTGGIIYGKAGILEAYSTGRGRVKLRAK
SRFEQIGQREQIIIEEIPYQTNKAKLVEQISELARDKIIEGIAEVRDESDREGVRVVIEL
KKDAIAQIVLNHLYKSSALESTFSMILLAIYNKEPRIFNLLELLKLFLVHRKTIVIRRTI
FELEKARARVHILKGLLIALQNSEAVIALIKSSADTLGAKEALAKAHHLSEEQSKAILDM
RLQRLTGLEQEKIQQEHTQLQERIGYLQGILENADKLNNLIKEELLEIKEKFDSPRLTQI
EEDYETLGVEDLIAHEDMVVTLSHRGYVKRMPLKVYEQQRRGGKGKISGNTHEDDFIEFF
FSANTHDTILFVTNMGQLYWLKVYRIPEMGRSAIGKALVNLIDLQPGERIKATLSTADFS
PDKSLVFFTKKGLIKRTNLSAFGRTRGGVRAIVLDEDDAFVTAQILNSGTQELFMASSKG
MCIRFGIEGVREIGRVARGVIGMRLRAGDEVIGGGVISSEQEKLLSVSSKGLGKQTLAGA
YRLQGRGGMGVIAMKITPKTGDLIGIVSVDESQDLMILTKSGKMIRMPMESIRETGRNAS
GVKLVSVEGDVVVYANTCPKEESE
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaaagatgtcaaaattgaggagtccttacaagagagttatttagactactcc
atgagtgtgattgtggggcgtgctctgcctgatgctagagatgggctaaagcctgtgcat
cggcgtattttgtatgccatgcatgaattgggcttgggctctaaggtgggctataagaaa
agcgcgcgcattgtgggggatgtcattggtaaataccacccgcatggggatagtgcagtt
tatgaggcattggtgcgtatggcgcaagactttagcatgcgcttgcccctagtggatggg
cagggcaattttggctccattgatggggataatgccgcagcgatgcgttacactgaggcg
cgcatggcagcccctagcgaggaactgctaagggatattgaaaaagacacggtggatttt
aacgacaactatgacagcacgcttaaagaacctgatattttgcctagccgcttgcctaac
ttactcatcaatggctcaagcgggattgctgtgggcatggcgacctccattcccccccac
cgccccagtgagatcatcgatgcgttggtgttggtgctagataacccccaaattgatctg
ctctctattttggaagtgattcaaggtccagatttccccacgggggggattatttatggc
aaggcgggcattttagaggcttatagcacggggcgggggcgtgtcaagctcagagccaag
agtcgttttgagcaaatcgggcaaagagaacagattatcattgaggaaatcccttaccaa
accaataaagccaaattagtcgagcaaatcagcgagttagcgcgcgataaaatcatagag
gggatcgctgaggttagagatgaatccgatcgggagggggtgcgcgtggtgattgagctt
aaaaaggatgcgatcgcccaaattgtgctcaaccacctttataaatccagtgccctagag
agcacctttagcatgatcttgctggctatttacaacaaagagccccgcattttcaacctc
ttagaactcttaaaactctttttggtgcatcgcaaaaccattgtgatcagacgcaccatt
tttgagctagaaaaggcaagggcaagggtgcatattttaaagggcttgctaattgccttg
caaaatagcgaggcggtgattgcgctcattaaaagcagtgcggacactctgggggctaaa
gaggcattagccaaagcgcatcacttgagcgaggagcagagcaaggcgattttggatatg
cgtttgcaacgcttaacagggctagagcaagaaaaaatccagcaagaacacacccagctt
caagaacgcatcgggtatttgcaaggcattttggagaatgccgacaagctcaacaatttg
atcaaagaggagcttttggaaatcaaagaaaaatttgatagcccaagactcacccaaatt
gaggaggactatgaaactttaggcgtggaggacttgatcgcccatgaggacatggttgtt
acactcagccacagaggttatgtcaagcgcatgcccttaaaagtctatgaacaacaaagg
cgcgggggcaagggcaaaatctcgggcaacacgcatgaggatgactttatcgagtttttc
tttagcgctaacacacatgacaccattttatttgttaccaacatggggcaactctattgg
ctcaaagtttatcgcatccctgagatggggcgtagtgccattggcaaggcattggtgaat
ttaatagatttgcaacccggggagcgcattaaagcgaccttatccaccgctgattttagc
ccggataagtccttagtctttttcactaaaaagggcttaatcaaacgcaccaatctaagt
gcctttgggcgcacacgcgggggggtgcgtgccattgtgcttgatgaagatgatgccttt
gtaaccgcccaaattttaaactctggcacgcaagaactcttcatggcaagctcaaagggg
atgtgtatccgctttggcatagagggggttagagagattgggcgtgtggctaggggggtt
ataggcatgcgtcttagagcaggcgatgaggtgatcggggggggcgtgatctctagcgaa
caagaaaagctactcagtgtcagctctaaggggcttggcaagcaaaccttagcgggggct
taccgcttgcaagggcggggcggcatgggcgtgattgccatgaaaatcacgcctaaaacg
ggggatttgatcggcattgtgagcgtggatgaaagccaagatttaatgatcttaaccaaa
agtggcaagatgattcgcatgcccatggagagtatccgcgaaacggggcgtaatgccagt
ggggttaaactggtgagcgtggaaggcgatgtggtggtctatgctaacacatgccccaaa
gaagaaagtgaataa
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